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Publications

CeZAP affiliated faculty publish hundreds of peer-reviewed scientific articles annually including many published in Nature, Science, Cell, Nature Communications and Proceedings of the National Academy of Sciences, USA. 

Dominant remodelling of cattle rumen microbiome by Schedonorus arundinaceus (tall fescue) KY-31 carrying a fungal endophyte. Khairunisa BH, Susanti D, Loganathan U, Teutsch CD, Campbell BT, Fiske D, Wilkinson CA, Aylward FO, Mukhopadhyay BAccess Microbiol. DOI: 10.1099/acmi.0.000322

Porous Antimicrobial Coatings for Killing Microbes within Minutes Behzadinasab S, Williams MD, Aktuglu M, Falkinham JO 3rd, Ducker WA.  ACS Appl Mater Interfaces DOI: 10.1021/acsami.2c22240

Cupric Oxide Coating That Rapidly Reduces Infection by SARS-CoV-2 via Solids Hosseini M, Chin A, Behzadinasab S, Poon L, Ducker W. ACS Appl Mater Interfaces DOI: 10.1021/acsami.0c19465

Comparison of Bulk- vs. Layer-by-layer-cured Stimuli-responsive PNIPAM-Alginate Hydrogel Dynamic Viscoelastic Property Response via Embedded Sensors  Liu Y, Bethel K, Singh M, J. Zhang J, Ashkar R,  Davis E, Johnson B. ACS Applied Polymer Materials DOI: 10.1021/acsapm.2c00634

Thermorubin biosynthesis initiated by a salicylate synthase suggests an unusual conversion of phenols to pyrones McCord, J. P, Kohanov, Z. A., Lowell, A.N.,  ACS Chem Biol. DOI: 10.1021/acschembio.2c00606

Dimeric Tacrine(10)-hupyridone as a Multitarget-Directed Ligand To Treat Alzheimer's Disease Xuan Z, Gu X, Yan S, Xie Y, Zhou Y, Zhang H, Jin H, Hu S, Mak M, Zhou D, Tsim K, Carlier P, Han Y, Cui W. ACS Chem Neurosci DOI: 10.1021/acschemneuro.1c00182

Structure–Activity Relationship Studies of Acetazolamide-Based Carbonic Anhydrase Inhibitors with Activity against Neisseria gonorrhoeae Hewitt C, Abutaleb N, Elhassanny A, Nocentini A, Cao X, Amos D, Youse M, Holly K, Marapaka A, An W, Kaur J, Krabill A, Elkashif A, Elgammal Y, Graboski A, Supuran C, Seleem M, Flahert D. ACS Infect Dis  DOI: 10.1021/acsinfecdis.1c00055

Structural and Biochemical Characterization of the Flavin - Dependent Siderophore-Interacting Protein from Acinetobacter baumanni Valentino H, Korasick D, Bohac T, Shapiro J, Wencewicz, Tanner J, Sobrado P.  ACS Omega  DOI: 10.1021/acsomega.1c03047

Sphingosine Kinase 2 Inhibitors: Rigid Aliphatic Tail Derivatives Deliver Potent and Selective Analogues. Pashikanti S, Foster DJ, Kharel Y, Brown AM, Bevan DR, Lynch KR, Santos WL.  ACS Bio Med Chem Au DOI: 10.1021/acsbiomedchemau.2c00017

Forgotten Natural Products: Semisynthetic Development of Blasticidin S As an Antibiotic Lead Gannett C, Tiller K, Briganti AJ, Brown AM, Weger-Lucarelli J, Lowell AN ACS Med Chem Lett  DOI: 10.1021/acsmedchemlett.3c00527

Sphingosine Kinase 2 Inhibitors: Rigid Aliphatic Tail Derivatives Deliver Potent and Selective Analogues. Pashikanti S, Foster DJ, Kharel Y, Brown AM, Bevan DR, Lynch KR, Santos WL.  ACS Bio Med Chem Au DOI: 10.1021/acsbiomedchemau.2c00017

Use of partial N-gene sequences as a tool to monitor progress on rabies control and elimination efforts in Ethiopia Binkley L, Deressa A, Shi M, Jara M, Escobar LE, Mauldin M, Matheney A, O'Quin J, Pieracci E Kling C, Hartloge C, Timer G, Abate E, Gebreyes W, Reynolds M Belay E, Shiferaw M, Nakazawa Y, Velasco-Villa A. Acta Trop DOI: 10.1016/j.actatropica.2021.106022

Photoswitchable Microgel for Dynamic Macrophage ModulationKim Y, Thangam R, Yoo J, Heo J, Park JY, Kang N, Lee S, Yoon J, Mun KR, Kang M, Min S, Kim SY, Son S, Kim J, Hong H, Bae G, Kim K, Lee S, Yang L, Lee JY, Kim J, Park S, Kim DH, Lee KB, Jang WY, Kim BH, Paulmurugan R, Cho SW, Song HC, Kang SJ, Sun W, Zhu Y, Lee J, Kim HJ, Jang HS, Kim JS, Khademhosseini A, Kim Y, Kim S, Kang H. Adv Mater.  DOI: 10.1002/adma.202205498

Inward and outward effectiveness of cloth masks, a surgical mask, and a face shield. Pan J, Harb C, Leng W, Marr L.  Aerosol Sci Tech DOI: 10.1080/02786826.2021.1890687

Enzyme-Triggered Chemodynamic Therapy via a Peptide-H2 S Donor Conjugate with Complexed Fe2.Zhu Y, Archer WR, Morales KF, Schulz MD, Wang Y, Matson JB. Angew Chem Int Ed Engl. DOI: 10.1002/anie.202302303

Loading of Amino Acids onto RNA in a Putative RNA-Peptide World. Singer JN, Müller FM, Węgrzyn E, Hölzl C, Hurmiz H, Liu C, Escobar L, Carell T. Angew Chem Int Ed Engl DOI: 10.1002/anie.202302360

Public Health Responses to Pandemics in 1918 and 2020 Ewing ET. Am J Public Health DOI: 10.2105/AJPH.2021.306453

Using Multidimensional Separations to Distinguish Isomeric Amino Acid-Bile Acid Conjugates and Assess Their Presence and Perturbations in Model Systems. Stewart AK, Foley MH, Dougherty MK, McGill SK, Gulati AS, Gentry EC, Hagey LR, Dorrestein PC, Theriot CM, Dodds JN, Baker ES. Anal Chem. DOI: 10.1021/acs.analchem.3c03057

Nutritional Evaluation of Black Soldier Fly Frass as an Ingredient in Florida Pompano (Trachinotus carolinus L.) Diets. Banavar A, Amirkolaei SK, Duscher L, Khairunisa BH, Mukhopadhyay B, Schwarz M, Urick S, Ovissipour R.  Animals (Basel). DOI: 10.3390/ani12182407

Finding What is Inaccessible: Antimicrobial Resistance Language Use among the One Health Domains Wind L, Briganti J, Brown AM, Neher T, Davis M, Durso L, Spicer T, Lansing S.  Antibiotics DOI: 10.3390/antibiotics10040385

Modulation of innate immune memory dynamics by subcellular ROS. Geng S, Lin R, Wu Y, Wang J, Li LAntioxid Redox Signal DOI: 10.1089/ars.2023.0304


Venezuelan equine encephalitis virus E1 protein interacts with PDIA6 and PDI inhibition reduces alphavirus production Panny L, Akrhymuk I, Bracci N, Woodson C, Flor R, Zhou W, Narayanan A, Campbell C, Kehn-Hall KAntiviral Res. DOI:10.1016/j.antiviral.2023.10556

Homoseongomycin, a compound isolated from marine actinomycete bacteria K3-1, is a potent inhibitor of encephalitic alphaviruses Lin SC, Lehman C, Steward AK, Panny L, Bracci N, Wright JLC, Paige M, Strangman WK, Kehn-Hall K.  Antiviral Res 
DOI: 10.1016/j.antiviral.2021.105087

Methodological differences between studies confound one-size-fits-all approaches to managing surface waterways for food and water safety Weller DL, Murphy CM, Love TMT, Danyluk MD, Strawn LK Appl Environ Microbiol  DOI: 10.1128/aem.01835-23

Shifting effects of host physiological condition following pathogen establishment. Langwig KE, Kilpatrick AM, Kailing MJ, Laggan NA, White JP, Kaarakka HM, Redell JA, DePue JE, Parise KL, Foster JT, Hoyt JRBiol Lett DOI: 10.1098/rsbl.2022.0574

Kinetic and Structural Characterization of a Flavin-Dependent Putrescine N-Hydroxlayse from Acinetobacter baumanni Lyon N, Bogner A, Tanner J, Sobrado P. Biochemistry DOI: 10.1021/acs.biochem.2c00493

Characterization of a Nitro-Forming Enzyme Involved in Fosfazinomycin Biosynthesis Valentino H, Sobrado PBiochemistry DOI: 10.1021/acs.biochem.1c00512

Chitosan as a Canvas for Studies of Macromolecular Controls on CaCO3 Biological Crystallization. Knight BM, Edgar KJ, De Yoreo JJ, Dove PM. Biomacromolecules. DOI: 10.1021/acs.biomac.2c01394

Simulations of cross-amyloid aggregation of amyloid-β and islet amyloid polypeptide fragments Kawecki GE, King KM, Cramer NA, Bevan DR, Brown AM. Biophys J DOI: 10.1016/j.bpj.2022.05.007

Mechanical limitation of bacterial motility mediated by growing cell chains. McMahon SG, Melville SB, Chen J. Biophys J. DOI: 10.1016/j.bpj.2022.05.012

Molecular simulations and NMR reveal how lipid fluctuations affect membrane mechanics. Doktorova M, Khelashvili G, Ashkar R, Brown MF. Biophys J. DOI: 10.1016/j.bpj.2022.12.007


A selective sweep in the Spike gene has drive SARS-CoV-2 human adaptation. Kang L, G. He,  A.K. Sharp, X. Wang, A.M. Brown, P. Michalak, J. Weger-LucarelliBioRxiv. doi:10.1101/2021.02.13.431090

A novel synthetic sRNA promoting protein overexpression in cell-free systems Tanniche I, Nazem-Bokaee H, Scheer DM, Schlemmer S, Senger RS. Biotechnol Prog DOI: 10.1002/btpr.3324

AgroSeek: a system for computational analysis of  environmental metagenomic data and associated metadata Liang X, Akers K, Keenum I, Wind L, Gupta S, Chen C, Aldaihani R, Pruden A, Zhang L, Knowlton K, Xia K, Heath L. BMC Bioinformatics DOI: 10.1186/s12859-021-04035-5

Phylogenomics revealed migration routes and adaptive radiation timing of Holarctic malaria mosquito species of the Maculipennis Group. Yurchenko AA, Naumenko AN, Artemov GN, Karagodin DA, Hodge JM, Velichevskaya AI, Kokhanenko AA, Bondarenko SM, Abai MR, Kamali M, Gordeev MI, Moskaev AV, Caputo B, Aghayan SA, Baricheva EM, Stegniy VN, Sharakhova MV, Sharakhov IV.BMC Biol DOI: 10.1186/s12915-023-01538-w.


Particle-mediated Histotripsy for the Targeted Treatment of Catheter-based Medical Device Biofilms Childers C, Edsall C, Mehochko I, Mustafa W, Durmaz Y, Klibanov A, Rao J, Vlaisavljevich E. BME Frontiers 

Covid-19 has redefined airborne transmission Tang J, Marr L, Li Y, Dancer S. BMJ DOI: 10.1136/bmj.n913


Can indoor sports centers be allowed to re-open during the COVID-19 pandemic based on a certificate of equivalence? Bloken B, van Druenen T, van Hooff T, Verstappen PA, Marchal T, Marr LCBuild Environ. 2020 Aug 180:107022. doi: 10.1016/j.buildenv.2020.107022

A selective sweep in the Spike gene has driven SARS-CoV-2 human adaptation Kang L, He G, Sharp A, Wang XBrown A, Michalak P, Weger-Lucarelli J. Cell DOI: 10.1016/j.cell.2021.07.007

Designing synergistic crystallization inhibitors: Bile salt derivatives of cellulose with enhanced hydrophilicity. Novo DC, Gao C, Qi Q, Mosquera-Giraldo LI, Spiering GA, Moore RB, Taylor LS, Edgar KJ. Carbohydr Polym. DOI: 10.1016/j.carbpol.2022.119680

Preparation and properties of dual-wavelength excitable fluorescent Lyocell fibers and their applications in papermaking Zhang H, Yang G, Edgar KJ, Zhong G, Liu G, Liu P, Li M, Shao H. Carbohydr Polym  DOI: 10.1016/j.carbpol.2021.11786

Dess-Martin oxidation of hydroxypropyl and hydroxyethyl cellulose, and exploration of their polysaccharide/polypeptide hydrogels. Zhang J, Wang S, Tang Y, Liu F, Zhao Y, Chen J, Edgar K. Carbohydr Polym DOI: 10.1016/j.carbpol.2023.121732

Phosphine-catalyzed regio- and stereo-selective hydroboration of ynamides to (Z)-β-borylenamides. Jos S, Tan C, Thilmany P, Saadane A, Slebodnick C, Evano G, Santos WL. Chem Commun (Camb) DOI: 10.1039/d2cc04543e

First-Row d-Block Element-Catalyzed Carbon-Boron Bond Formation and Related Processes Bose S, Mao L, Kuehn L, Radius U, Nekvinda J, Santos WL, Westcott S, Steel P, Marder T. Chem Rev DOI: 10.1021/acs.chemrev.1c00255

Structure-Activity Relationship Study to Develop Peptide Amphiphiles as Species-Specific Antimicrobials. Pereira AJ, Xing H, de Campos LJ, Seleem MA, de Oliveira KMP, Obaro SK, Conda-Sheridan M. Chemistry DOI: 10.1002/chem.202303986

Cholesterol stiffening of lipid membranes and drug interactions: Insights from neutron spin echo and deuterium NMR spectroscopy. Gupta S, Doole FT, Kumarage T, Doktorova M, Khelashvili G, Ashkar R, Brown MF. Cholesterol Chapter 29 DOI: 10.1016/B978-0-323-85857-1.00037-7 

Airborne transmission of SARS-CoV-2: What We Know. Samet JM, Parther K, Benjamin G, Lakdawala S, Lowe JM, Reingold A, Volckens J. Marr LC. Clin Infect Dis. 2021 Jan 18:ciab039. doi: 10.1093/cid/ciab039

A Paradigm Shift to Align Transmission Routes with Mechanisms Marr LC, Tang J. Clin Infect Dis DOI: 10.1093/cid/ciab722

Risk of SARS-CoV-2 Transmission among Air Passengers in China Hu M, Wang J, Lin H, Ruktanonchai C, Xu C, Meng B, Zhang X, Carioli A, Feng Y, Yin Q, Floyd J, Ruktanonchai NW, Li Z, Yang W, Tatem A, Lai S
Clin Infect Dis  DOI: 10.1093/cid/ciab836

Visualization of the Linear and Spatial Organization of Chromosomes in Mosquitoes.Liang J, Bondarenko SM, Sharakhov IV, Sharakhova MV. Cold Spring Harb Protoc. DOI: 10.1101/pdb.top107732

Visualization of the Linear and Spatial Organization of Chromosomes in Mosquitoes  Liang J, Bondarenko SM, Sharakhov IV, Sharakhova MV Cold Spring Harb Protoc. DOI: 10.1101/pdb.top107732

Visualization of Polytene Chromatin in Mosquito Cell Nuclei Using Three-Dimensional Fluorescence In Situ Hybridization Bondarenko SM, Liang J, Sharakhova MV, Sharakhov IV. Cold Spring Harb Protoc. DOI: 10.1101/pdb.prot107873

Obtaining Polytene, Meiotic, and Mitotic Chromosomes from Mosquitoes for Cytogenetic Analysis Liang J, Bondarenko SM, Sharakhov IV, Sharakhova MV. Cold Spring Harb Protoc. DOI: 10.1101/pdb.prot107872

Retrospective Review of and Introduction to the Analysis of Mosquito Optomotor Responses. Vinauger C, Riffell JA. Cold Spring Harb Protoc DOI: 10.1101/pdb.top107672

The Systems and Synthetic Biology of Auxin Wright RC, Moss B, Nemhauser J. Cold Spring Harb Perspect Biol 
DOI: 10.1101/cshperspect.a040071

The Systems and Synthetic Biology of Auxin Wright RC, Moss B, Nemhauser J. Cold Spring Harb Perspect Biol DOI: 10.1101/cshperspect.a040071

Tethered Preparation for the Analysis of Mosquito Visual-Motor Responses Using Modular Visual Displays. Vinauger C, Riffell JA. Cold Spring Harb Protoc DOI: 10.1101/pdb.prot108179

Multiple Dimensions of Aedes aegypti Population Growth: Modeling the Impacts of Resource Dependence on Mass and Age at Emergence,  Walker, M. Robert MA, Childs LM.
Comput Math Population Dynamics DOI: 10.1142/9789811263033_0006. 

Extending Analytical Solutions to Age–Mass Models of a Population Prosper OF, Childs LM Comput Math Population Dynamics DOI: 10.1142/9789811263033_0008

Targeting protein-protein interaction interfaces in COVID-19 drug discovery Chang C, Lin SM, Satange R, Lin SC, Sun SC, Wu HY, Kehn-Hall K, Hou MH. Comput. Struct. Biotechnol. J  DOI: 10.1016/j.csbj.2021.04.003

Probiotics: insights and new opportunities for Clostridioides difficile intervention. Pal R, Athamneh AIM, Deshpande R, Ramirez JAR, Adu KT, Muthuirulan P, Pawar S, Biazzo M, Apidianakis Y, Sundekilde UK, de la Fuente-Nunez C, Martens MG, Tegos GP, Seleem MNCrit Rev Microbiol DOI: 10.1080/1040841X.2022.2072705

Thermal biology of invasive Aedes mosquitoes in the context of climate change. Lahondère C, Bonizzoni M. Curr Opin Insect Sci DOI: 10.1016/j.cois.2022.100920

Airborne transmission of respiratory viruses including severe acute respiratory syndrome coronavirus 2. Tang JW, Marr LC, Tellier R, Dancer SJ. Curr Opin Pulm Med. DOI: 10.1097/MCP.0000000000000947

The viability of SARS-CoV-2 on solid surfaces Hosseini M, Behzadinasab S, Benmamoun Z, Ducker WACurr Opin Colloid Interface Sci DOI: 10.1016/j.cocis.2021.101481

Reconstruction landscapes of ungulate parturition and predation using vegetation phenology Van de Vuurst P, Moore S, Isaac E, Chenauz-Ibrahim Y, Wolf T, Escobar LE Curr Zool DOI: 10.1093/cz/zoab058

In the wind: Invasive species travel along predictable atmospheric pathways.Pretorius I, Schou WC, Richardson B, Ross SD, Withers TM, Schmale DG 3rd, Strand TM.Ecol Appl DOI: 10.1002/eap.2806

Investigating illegal activities that affect biodiversity: the case of wildlife consumption in the Brazilian Amazon Chaves W, Valle D, Tavares A, von Mühlen E, Wilcove D. Ecol Appl  DOI: 10.1002/eap.2402

Emergent properties of microbial communities drive accelerated biogeochemical cycling in disturbed temperate forests Osburn E, Badgley B, Strahm B, Aylward F, Barrett JE. Ecology  DOI: 10.1002/ecy.3553

Host infection and disease-induced mortality modify species contributions to the environmental reservoir. Laggan NA, Parise KL, White JP, Kaarakka HM, Redell JA, DePue JE, Scullon WH, Kath J, Foster JT, Kilpatrick AM, Langwig KE, Hoyt JREcology. DOI: 10.1002/ecy.4147

A timeline of bacterial and archaeal diversification in the ocean. Martinez-Gutierrez CA, Uyeda JC, Aylward FO. Elife DOI: 10.7554/eLife.88268

 

Vaccine Effectiveness during Outbreak of COVID-19 Alpha (B.1.1.7) Variant in Men's Correctional Facility, United States Silverman, R. Ceci A, Cohen A, Helmick M, Short E, Bordwine P, Friedlander M, Finkielstein C.  Emerg Infect Dis DOI: 10.3201/eid2807.220091

Novel murine models for studying Cache Valley virus pathogenesis and in utero transmission López K, Wilson SN, Coutermash-Ott S, Tanelus M, Stone WB, Porier DL, Auguste DI, Muller JA, Allicock OM, Paulson SL, Erasmus JH, Auguste AJ. Emerg Microbes Infect 
 
DOI:10.1080/22221751.2021.1965497

Nitrogen transformation processes catalyzed by manure microbiomes in earthen pit and concrete storages on commercial dairy farms Khairunisa BH, Loganathan U, Ogejo JA, Mukhopadhyay B.
Environ Microbiome DOI: 10.1186/s40793-023-00483-z

Bacterial community dynamics on bats and the implications for pathogen resistance Li A, Li Z, Dai W, Parise K, Leng H Jin L, Liu S, Sun K, Hoyt JR, Feng J. Environ Microbiol DOI: 10.1111/1462-2920.15754


Towards risk assessment for antibiotic resistant pathogens in recycled water: A systematic review and summary of research needs Garner E, Organiscak M, Dieter L, Shingleton C, Haddix M, Joshi S, Pruden A, Ashbolt N, Medema G, Hamilton K Environ Microbiol DOI: 10.1111/1462-2920.15804

Examining the association between safe drinking water act violations and adverse birth outcomes in Virginia. Young HA, Kolivras KN, Krometis LH, Marcillo CE, Gohlke JM. Environ Res. DOI: 10.1016/j.envres.2022.114977

Critical review of antibiotic resistance genes in the atmosphere Kormos D, Lin K, Pruden A, Marr LC Environ Sci Process Impacts DOI: 10.1039/d2em00091a

Phage Predation Promotes Filamentous Bacterium Piscinibacter Colonization and Improves Structural and Hydraulic Stability of Microbial Aggregates.Yu Z, Chen J, Tan Y, Shen Y, Zhu L, Yu P. Environ Sci Technol. DOI: 10.1021/acs.est.2c04745

Demonstrating a Comprehensive Wastewater-Based Surveillance Approach That Differentiates Globally Sourced Resistomes. Prieto Riquelme MV, Garner E, Gupta S, Metch J, Zhu N, Blair MF, Arango-Argoty G, Maile-Moskowitz A, Li AD, Flach CF, Aga DS, Nambi IM, Larsson DGJ, Bürgmann H, Zhang T, Pruden A, Vikesland PJ. Environ Sci Technol. DOI: 10.1021/acs.est.1c08673

Antimicrobial Resistance in the Environment: Informing Policy and Practice to Prevent the Spread. Pruden A. Environ Sci Technol DOI: 10.1021/acs.est.2c07503

Phage Predation Promotes Filamentous Bacterium Piscinibacter Colonization and Improves Structural and Hydraulic Stability of Microbial Aggregates.Yu Z, Chen J, Tan Y, Shen Y, Zhu L, Yu P. Environ Sci Technol. DOI: 10.1021/acs.est.2c04745

Demonstrating a Comprehensive Wastewater-Based Surveillance Approach That Differentiates Globally Sourced Resistomes. Prieto Riquelme MV, Garner E, Gupta S, Metch J, Zhu N, Blair MF, Arango-Argoty G, Maile-Moskowitz A, Li AD, Flach CF, Aga DS, Nambi IM, Larsson DGJ, Bürgmann H, Zhang T, Pruden A, Vikesland PJ. Environ Sci Technol. DOI: 10.1021/acs.est.1c08673

Integrating Environmental Dimensions of "One Health" to Combat Antimicrobial Resistance: Essential Research Needs. Jin L, Pruden A, Boehm AB, Alvarez PJJ, Raskin L, Kohn T, Li X. Environ Sci Technol DOI: 10.1021/acs.est.2c01651

Antimicrobial Resistance Monitoring of Water Environments: A Framework for Standardized Methos and Quality Control Liguori K, Keenum I, Davis B, Calarco J, Milligan E, Harwood V, Pruden AEnviron Sci Technol DOI: 10.1021/acs.est.1c08918

Source-to-Tap Assessment of Microbiological Water Quality in Small Rural Drinking Water Systems in Puetro Rico Six Months After Hurricane Maria Keenum I, Medina M, Garner E, Pieper K, Blair M, Milligan E, Pruden A, Ramierez-Toro G, Rhodes W. Environ Sci Technol
DOI:10.1021/acs.est.0c08814

Surface-Enhanced Raman Spectroscopy of Bacterial Metabolites for Bacterial Growth Monitoring and Diagnosis of Viral Infection Wang W, Kang S, Vikesland P. Environ Sci Technol DOI: 10.1021/acs.est.1c02552

Relative Humidity Predicts Day-to-Day Variations in COVID-19 Cases in the City of Buenos Aires Rojas A, Cordo S, Saurral R, Jimenez J, Marr LC, Kropff E. Environ Sci Technol DOI: 10.1021/acs.est.1c02711

Data Analytics for Environmental Science and Engineering Research Gupta S, Aga D, Pruden A, Zhang L, Vikesland PEnviron Sci Technol DOI: 10.1021/acs.est.1c01026

Relative Humidity Predicts Day-to-Day Variations in COVID-19 Cases in the City of Buenos Aires Rojas A, Cordo S, Saurral R, Jimenez J, Marr LC, Kropff E. Environ Sci Technol DOI: 10.1021/acs.est.1c02711

Mapping the Terrain for Pathogen Persistence and Proliferation in Non-potable Reuse Distribution Systems: Interactive Effects of Biofiltration, Disinfection, and Water Age Ghosh S, Zhu N, Milligan E, O'Falkinham J, Pruden A, Edwards M, Environ Sci Technol DOI: 10.1021/acs.est.1c02121

Stability of Aerosolized SARS-CoV-2 on Masks and Transfer to Skin. Pan J, Gmati S, Roper BA, Prussin AJ 2nd, Hawks SA, Whittington AR, Duggal NK, Marr LC. Environ Sci Technol. DOI: 10.1021/acs.est.3c01581

Metabolite-Mediated Bacterial Antibiotic Resistance Revealed by Surface-Enhanced Raman Spectroscopy. Wang W, Vikesland PJ. Environ Sci Techno DOI: 10.1021/acs.est.3c04001

Shotgun Metagenomics Reveals Impacts of Copper and Water Heater Anodes on Pathogens and Microbiomes in Hot Water Plumbing Systems. Song Y, Finkelstein R, Rhoads W, Edwards MA, Pruden A. Environ Sci Technol DOI: 10.1021/acs.est.3c03568

Aerosolized Cyanobacterial Harmful Algal Bloom Toxins: Microcystin Congeners Quantified in the Atmosphere. Shi JH, Olson NE, Birbeck JA, Pan J, Peraino NJ, Holen AL, Ledsky IR, Jacquemin SJ, Marr LC, Schmale DG 3rd, Westrick JA, Ault AP. Environ Sci Techno 
DOI: 10.1021/acs.est.3c03297

Premise Plumbing Pipe Materials and In-Building Disinfectants Shape the Potential for Proliferation of Pathogens and Antibiotic Resistance Genes. Cullom A, Spencer MS, Williams MD, Falkinham JO 3rd, Brown C, Edwards MA, Pruden A. Environ Sci Techno DOI: 10.1021/acs.est.3c05905

Digital Surface-Enhanced Raman Spectroscopy-Lateral Flow Test Dipstick: Ultrasensitive, Rapid Virus Quantification in Environmental Dust Wang W, Srivastava S, Garg A, Xiao C, Hawks S, Pan J, Duggal N, Isaacman-VanWertz G, Zhou W, Marr LC, Vikesland PJ. Environ Sci Technol DOI: 10.1021/acs.est.3c10311

The Human Right to Water: A 20-Year Comparative Analysis of Arsenic in Rural and Carceral Drinking Water Systems in California. Rempel, J., Ray, I., Hessl, E., Vazin, J., Zhou, Z., Kim, S., Zhang, X., Ding, C., He, Z., Pellow, D., Cohen, A. Environmental Health Perspectives, DOI: 10.1289/EHP10758

Experimental test of microbiome protection across pathogen doses reveals importance of resident microbiome composition Weitzman C, Rostama B, Thomason C, May M, Belden L, Hawley DM. FEMS Microbiol Ecol 
DOI: 10.1093/femsec/fiab141

Development of a Controlled Laboratory-scale Inoculation System to Study Vibrio parahaemolyticus-oyster Interactions Hines I, Smith S, Kuhn DD, Stevens AMFEMS  Microbiol Lett DOI: 10.1093/femsle/fnac055

Virologs, viral mimicry, and virocell metabolism: The expanding scale of cellular functions encoded in the complex genomes of giant viruses. Moniruzzaman M, Erazo-Garcia PM, Farzad R, Ha AD, Jivaji A, Karki S, Sheyn U, Stanton J, Minch B, Stephens D, Hancks DC, Rodrigues RA, Abrahao JS, Vardi A, Aylward FOFEMS Microbiol Lett.  DOI: 10.1093/femsre/fuad053

Virologs, viral mimicry, and virocell metabolism: the expanding scale of cellular functions encoded in the complex genomes of giant viruses Moniruzzaman M, Erazo Garcia MP, Farzad R, Ha AD, Jivaji A, Karki S, Sheyn U, Stanton J, Minch B, Stephens D, Hancks DC, Rodrigues RAL, Abrahao JS, Vardi A, Aylward FO. FEMS Microbiol Rev DOI: 10.1093/femsre/fuad053

Fire, land cover, and temperature drivers of bat activity in winter Jorge M, Sweeten S, True M, Freeze Sm, Cherry M, Garrison E, Taylor H, Gorman K, Ford WM.  Fire Ecology  DOI:10.1186/s42408-021-00105-4

Replication in the presence of dengue convalescent serum impacts Zika virus neutralization sensitivity and fitness. Marano JM, Weger-Lucarelli J. Front Cell Infect Microbiol. DOI: 10.3389/fcimb.2023.1130749

CEACAM1 Activation by CbpF-Expressing E. coli Shhadeh A, Galaski J, AlonMaimon T, Fahoum J, Weiner R, Slade D, Mandelboim F, Bachrach G. Front Cell Infect Microbiol DOI: 10.3389/fcimb.2021.699015

ARGem: a new metagenomics pipeline for antibiotic resistance genes: metadata, analysis, and visualization Liang X, Zhang J, Kim Y, Ho J, Liu K, Keenum IM, Gupta S, Davis B, Hepp SL, Zhang L, Xia K, Knowlton KF, Liao JVikesland PPruden A, Heath  LS  FrontGenetU DOI: 10.3389/fgene.2023.1219297

Biomembrane Structure and Material Properties Studied With Neutron Scattering Kinnun J, Scott H, Ashkar R, Katsaras J  Front Chem DOI: 10.3389/fchem.2021.642851

Human Milk Oligosaccharides Impact Cellular and Inflammatory Gene Expression and Immune Response Rosa F, Sharma AK, Gurung M, Casero D, Matazel K, Bode L, Simecka C, Elolimy AA, Tripp P, Randolph C, Hand TW, Williams KD, LeRoith T, Yeruva L. Front Immunol. DOI: 10.3389/fimmu.2022.907529

Immune response to arbovirus infection in obesity. Hameed M, Geerling E, Pinto AK, Miraj I, Weger-Lucarelli J.  Front Immunol. DOI: 10.3389/fimmu.2002.968582 

Coria LM, Saposnik LM, Pueblas Castro C, Castro EF, Bruno LA, Stone WBG, Pérez PS, Darriba ML, Chemes LB, Alcain J, Mazzitelli I, Varese A, Salvatori M, Auguste AJ, Álvarez DE, Pasquevich KA, Cassataro J**. A Novel Bacterial Protease Inhibitor Adjuvant in RBD-Based COVID-19 Vaccine Formulations Containing Alum Increases Neutralizing Antibodies, Specific Germinal Center B Cells and Confers Protection Against SARS-CoV-2 Infection in Mice. Front Immunol. 2022 Feb 28;13:844837. DOI: 10.3389/fimmu.2022.844837.

Abdelhamid LG, Luo XM (2022) “Diet and hygiene in modulating autoimmunity during the pandemic era.” Frontiers in Immunology 12:749774. DOI: 10.3389/fimmu.2021.749774

Aquaculture Reuse Water, Genetic LIne, and Vaccination Affect Rainbow Trout (Oncorhynchus mykiss) Disease Susceptibility and Infection Dynamics Everson J, Jones D, Taylor A, Rutan B, Leeds T, Langwig K, Wargo A, Weins G. Front Immunol DOI: 10.3389/fimmu.2021.721048

 

Steelhead trout (Oncorhynchus mykiss) fed probiotic during the earliest developmental stages have enhanced growth rates and intestinal microbiome bacterial diversity Hines IS, Santiago-Morales, KD, Ferguson CS, Clarington J, Thompson M, Rauschenbach M, Levine U, Drahos D, Aylward FO, Smith SA, Kuhn DD, Stevens AM. Front. Mar. Sci. DOI: 10.3389/fmars.2022.1021647

Strength Lies in Diversity: How Community Diversity Limits Salmonella Abundance in the Chicken Intestine Pedroso A, Lee M, Maurer J. Front Microbiol  DOI: 10.3389/fmicb.2021.694215

Integrated Metagenomic Assessment of Multiple Pre-harvest Control Points on Lettuce Resistomes at Field-Scale Wind L, Keenum I, Gupta S, Ray P, Knowlton K, Ponder M, Hession WC, Pruden A, Krometis L. Front Microbiol  DOI: 10.3389/fmicb.2021.683410

Outer Membrane Vesicles of Gram-Negative Bacteria: An Outlook on Biogenesis Avila-Calderón E, Ruiz-Palma M, Aguilera-Arreola M, Velázquez-Guadarrama N, Ruiz E, Gomez-Lunar, Witonsky S, Contreras-Rodríguez A.  Front Microbiol DOI: 10.3389/fmicb.2021.557902 

Genomic delineation and description of species and within-species lineages in the genus Pantoea. Crosby KC, Rojas M, Sharma P, Johnson MA, Mazloom R, Kvitko BH, Smits THM, Venter SN, Coutinho TA, Heath LS, Palmer M, Vinatzer BA. Front Microbiol
DOI: 10.3389/fmicb.2023.1254999

Peeling back the many layers of competitive exclusion Maurer JJ, Cheng Y, Pedroso A, Thompson KK, Akter S, Kwan T, Morota G, Kinstler S, Porwollik S, McClelland M, Excalante-Semerena JC, Lee MDFront Microbiol DOI: 10.3389/fmicb.2024.1342887

Pioneer colonizers: Bacteria that alter the chicken intestinal morphology and development of the microbiota. Lee MD, Pedroso AA, Lumpkins B, Cho Y, Maurer JJFront Physiol 
DOI: 10.3389/fphys.2023.1139321

Bacterial composition of a competitive exclusion product and its correlation with product efficacy at reducing Salmonella in poultry Lee MD, Pedroso AA, Maurer JJ. Front Physiol DOI: 10.3389/fphys.2022.1043383

Ingested histamine and serotonin interact to alter Anopheles stephensi feeding and flight behavior and infection with Plasmodium Parasites. Coles, TA, Briggs, AM, Hambly, MG, Céspedes, N, Fellows, AM, Kaylor, HL, Adams, AD, Van Susteren, G, Bentil, RE, Robert, MA, Riffell, JA, Lewis, EE, Luckart S. Front. Physiol. DOI: 10.3389/fphys.2023.1247316

The effects of molecular and nanoscopic additives on phospholipid membranes Kumarage T, Morris NB, Ashkar R. Front Phys DOI: 10.3389/fphy.2023.1251146

 

Canine melanoma: A review of diagnostics and comparative mechanisms of disease and immunotolerance in the era of the immunotherapies. Stevenson VB, Klahn S, LeRoith T, Huckle WR. Front Vet Sci. DOI: 10.3389/fvets.2022.1046636

Presumptive Identification of Smooth Brucella Strain Antibodies in Canines Helms A, Balogh O, Franklin-Guild R, Lahmers K, Casewell C, Cecre T. Front Vet Sci DOI: 10.3389/fvets.2021.697479

The Paratuberculosis Paradigm Examined: A Review of Host Genetic Resistance and Innate Immune Fitness in Mycobacterium avium subsp. Paratuberculosis Infection Kravitz A, Pelzer K, Sriranganathan N. Front Vet Sci DOI: 10.3389/fvets.2021.721706

Bacterial carbonic anhydrases: underexploited antibacterial therapeutic targets Flaherty D, Seleem M, Supuran C. Future Med Chem DOI: 10.4155/fmc-2021-0207

Comparative genomics of Lactobacillaceae from the gut of honey bees, Apis mellifera, from the Eastern US. Bradford EL, Wax N, Bueren EK, Walke JB, Fell R, Belden LK, Haak DC. G3 (Bethesda)DOI: 10.1093/g3journal/jkac286


SARS-CoV-2 infection in the gastrointestinal tract: fecal-oral route of transmission for COVID-19? Meng XJ, Liang, TJ. Gastroenterology 2021 Jan 7:S0016-5085(21)00030-5. doi:10.1053/j.gastro.2021.01.005

Chromosome-level genome assemblies of the malaria vectors Anopheles coluzzii and Anopheles arabiensis. Zamyatin A, Avdeyev P, Liang J, Sharma A, Chen C, Lukyanchikova V, Alexeev N, Tu Z, Alekseyev MA, Sharakhov IV. Gigascience
DOI: 10.1093/gigascience/giab017

Marker-assisted mapping enables forward genetic analysis in Aedes aegypti, an arboviral vector with vast recombination deserts Chen C, Compton A, Nikolouli K, Wang A, Aryan A, Sharma A, Qi Y, Dellinger C, Hempel M, Potters M, Augustinos A, Severson DW, Bourtzis K, Tu Z. Genetics. DOI: 10.1093/genetics/iyac140

Phenotypic adaptation to temperature in the mosquito vector, Aedes aegypti Dennington NL, Grossman MK, Ware-Gilmore MK, Ware-Gilmore F, Teeple JL, Johnson LR, Shocket MS, McGraw EA, Thomas MB. Global Change Biology DOI: 10.1111/gcb.17041

Population-specific responses to developmental temperature in the arboviral vector Aedes albopictus: Implications for climate change. Carlassara M, Khorramnejad A, Oker H, Bahrami R, Lozada-Chávez AN, Mancini MV, Quaranta S, Body MJA, Lahondère C, Bonizzoni M. Glob Chang Biol. DOI: 10.1111/gcb.17226

Establishment of a gnotobiotic pig model of Clostridioides difficile infection and disease  Nyblade C, Parreno V, Zhou P, Hensley C, Oakes V, Mahsoub HM, Kiley K, Frazier M, Frazier A, Zhang Y, Feng H, Yuan L. Gut Pathog  DOI: 10.1186/s13099-022-00496-y

Transmission of SARS-CoV-2 by inhalation of respiratory aerosol in the Skagit Valley Chorale superspreading event. Miller SL, Nazaroff WW, Jimenez JL, Boerstra A, Buonanno G, Dancer SJ, Kuritski J, Marr LC, Morawska L, Noakes C. Indoor Air. 2020 Sep 26:10.1111/ina.12751.doi: 10.1111/ina.12751

Correlating indoor and outdoor temperature and humidity in a sample of buildings in tropical climates Pan J, Tang J, Caniza M, Heraud J, Koay E, Lee H, Lee C, Li Y, Ruiz A, Santillan-Salas C, Marr LC. Indoor Air 
DOI: 10.1111/ina.12876

Neglected tropical diseases risk correlates with poverty and early ecosystem destruction. Magalhães AR, Codeço CT, Svenning JC, Escobar LE, Van de Vuurst P, Gonçalves-Souza T. Infect Dis Poverty  DOI: 10.1186/s40249-023-01084-1

Revealing the complexity of vampire bat rabies "spillover transmission Escobar LE, Velasco-Villa A, Satheshkumar PS, Nakazawa Y, Van de Vuurst P. Infect Dis Poverty DOI: 10.1186/s40249-023-01062-7

Host movement, transmission hot spots, and vector-borne disease dynamics on spatial networks. Saucedo O, Tien JH. Infectious Disease Modeling DOI: 10.48550/arXiv.2204.07678

Filtration evaluation of expired elastomeric P-100 filter cartridges after months of real-world use during the coronavirus disease 2019 (COVID-19) pandemic Baffoe-Bonnie A, Zhang K, Pan J, Simpkins K, Marr L. Infect Control Hosp Epidemiol DOI: 10.1017/ice.2021.104

CX3CR1 modulates SLE-associated glomerulonephritis and cardiovascular disease in MRL/lpr mice.
Cabana-Puig X, Lu R, Geng S, Michaelis JS, Oakes V, Armstrong C, Testerman JC, Liao X, Alajoleen R, Appiah M, Zhang Y, Reilly CM, Li L, Luo XM.  Inflamm Res. DOI: 10.1007/s00011-023-01731-1


A Gene-Based Method for Cytogenetic Mapping of Repeat-Rich Mosquito Genomes Masri RA, Karagodin DA, Sharma A, Sharakhova MVInsects DOI: 10.3390/insects12020138

Species-Specificity in Thermopreference and CO2-Gated Heat-Seeking in Culex Mosquitoes Reinhold JM, Chandrasegaran K, Oker H, Crespo JE, Vinauger CLahondère C.  Insects DOI: 10.3390/insects13010092

Physical Mapping of the Anopheles (Nyssorhynchus) darlingi Genomic Scaffolds Rafael M, Bridi L, Sharakhov IV, do Marinotti O, Sharakhova M, Timoshevskiy V, Guimaraes-Marques G, Santos V, da Silva C, Astolfi-Filho S, Tadei W. Insects
DOI: 10.3390/insects12020164

New Cytogenetic Photomap and Molecular Diagnostics for the Cryptic Species of the Malaria Mosquitoes Anopheles messeae and Anopheles daciae from Eurasia Artemov GN, Fedorova VS, Karagodin DA, Brusentsov II, Baricheva EM, Sharakhov IV, Gordeev MI, Sharakhova MV. Insects DOI: 10.3390/insects12090835

Pilot Testing of an Area-Wide Biological Control Strategy against the Coffee Berry Borer in Colombia Using African Parasitoids. Benavides P, Gil ZN, Escobar LE, Navarro-Escalante L, Follett P, Diaz-Soltero H. Insects DOI: 10.3390/insects14110865

 

Characterization of protein-protein interactinos between rice viruses and vector insects Zhu J, Eid F, Tong L, Zhao W, Wang W, Heath L, Kang L, Cui F. Insect Sci DOI: 10.1111/1744-7917.12840

How did we get here: what are droplets and aerosols and how far do they go? A historical perspective on the transmission of respiratory infectious diseases Randall K, Ewing ET, Marr LC, Jimenez L, Bourouiba L. Interface Focus DOI: 10.1098/rsfs.2021.0049

 

Maternal antibody repertoire restriction modulates the development of lupus-like disease in BXSB offspring. Zhu J, Naughton S, Bowman N, LeRioth T, Luo X, Leeth C. Int Immunol DOI: 10.1093/intimm/dxac049

Dalbavancin as sequential therapy for infective endocarditis due to Gram-positive organizms: A review Fazili T, Bansel E, Garnder D, Gomes M, Stornelli N. Int J Antimicrob Agents 
DOI: 10.1016/j.ijantimicag.2023.106749


Bottled and Well Water Quality in a Small Central Appalachian Community: Household-Level Analysis of Enteric Pathogens, Inorganic Chemicals, and Health Outcomes in Rural Southwest Virginia Cohen, A., Rasheduzzaman, M., Darling, A., Krometis, LA, Edwards, M., Brown, T., Ahmed, T., Wettstone, E., Pholwat, S., Taniuchi, M., & Rogawski McQuade, E.T.  Int J. Environ. Res Public Health  DOI: 10.3390/ijerph19148610 

Rapid Discovery and Detection of Haemaphysalis longicornis through the Use of Passive Surveillance and Collaboration: Building a State Tick-Surveillance Network Fryxell R, Vann D, Butler R, Paulsen D, Chandler J, Willia M, Wyrosdick H, Schaefer J Gerhold R, Grove D, Ivey J, Thompson K, Applegate R, Sweaney J, Daniels S, Beaty S, Balthaswer D, Freye J, Mertins J, Bonilla D, Lahmers KInt J Environ Res Public Health  DOI: 10.3390/ijerph18157980

Protein kinases in Toxoplasma gondii Gaji R, Sharp A, Brown A.  IJP 
DOI: 10.1016/j.ijpara.2020.11.006  

Flagellotropic Bacteriophages: Opportunities and Challenges for Antimicrobial Applications Esteves N, Scharf BEInt J Mol Sci DOI: 103390/ijms23137084

Infection strategy and biogeography distinguish cosmopolitan groups of marine jumbo bacteriophages Weinheimer A, Aylward F. ISME J. DOI: 10.1038/s41396-022-01214-x

Comparative genomics unveils extensive genomic variation between populations of Listeria species in natural and food‑associated environmentsLiao J, Guo X, Li S, Anupoju B, Cheng RA, Weller DL, Sullivan G, Zhang H, Deng X, Wiedmann M. ISME Communications DOI:10.1038/s43705-023-00293-x

Optimizing Pooled Testing for Estimating the Prevalence of Multiple Diseases.Warasi MS, Hungerford LL, Lahmers K. J Agric Biol Environ  DOI: 10.1007/s13253-022-00511-4

Engineered yeast. displaying specific norovirus-binding nanobodies for the concentration and detection of human norovirus in food matrix. Zhao X, Rahman M, Xu Z, Kasputis T, He Y, Yuan L, Wright RC, Chen J J Agric Food Chem DOI: 10.1021/acs.jafc.3c01946

Anaerobic Soil Disinfestation, Amendment-type, and Irrigation REgimen Influence Salmonella Survival and Die-Off in Agricultural Soils Murphy C, Weller D, Reiter M, Bardsley C, Eifert J, Ponder M, Rideout S, Strawn L. J Appl Microbiol DOI: 10.1111/jam.15324


Anaerobic Soil Disinfestation, Amendment-type, and Irrigation REgimen Influence Salmonella Survival and Die-Off in Agricultural Soils Murphy C, Weller D, Reiter M, Bardsley C, Eifert J, Ponder M, Rideout S, Strawn L. J Appl Microbiol DOI: 10.1111/jam.15324

NMP Model of the Entier Membrane-Interacting Region of the HIV-1 Fusion Protein and It's Perturbation of Membrane Morphology Piai A, Fu Q, Sharp A, Beatrice B, Brown AM, Chou J.  J Am Chem Soc DOI: 10.1021/jacs.1c01762  

Veterinarians show resilience during COVID-19: challenges faced and successful coping strategies. Darby BJ, Watkins ST, Haak PP, Ravi-Caldwell N, Bland K, Bissett CJ, Kryda KT, Murphy J, Hungerford L, Russon J. J Am Vet Med Assoc DOI: 10.2460/javma.22.12.0584

Host population dynamics in the face of an evoloving pathogen Hochachka W, Dobson A, Hawley D, Dhondt A. J Anim Ecol DOI: 10.1111/1365-2656.13469

Short-term consumption of the mycotoxin zearalenone by pubertal gilts causes persistent changes in the histoarchitecture of reproductive tissues. Soffa DR, Stewart JW, Pack ED, Arneson AG, De Vita R, Knight JW, Fausnacht DW, Rhoads RP, Clark SG, Schmale DG, Rhoads ML. J Anim Sci. DOI: 10.1093/jas/skac421

*Publication selected for cover photo

First isolation of Carnobacterium maltaromaticum from farmed rainbow trout Oncorhynchus mykiss in Virginia Smith, SA., Newman SJ, Harrison CE, Lock TP. J Aquat Anim Health DOI: 10.1002/aah.10176

A Reduced F420-Dependent Nitrite Reductase in an Anaerobic Methanotrophic Archaeon Heryakusuma C, Susanti D, Yu H, Li Z, Purwantini E, Hettich RL, Orphan VJ, Mukhopadhyay B. J Bacteriol DOI: 10.1128/jb.00078-22

Comparative Study of Bacterial SPOR Domains Identifies Functionally Important Differences in Glycan Binding Affinity Yahashiri A, Kaus GM, Popham DL, Houtman JCD, Weiss DS. J Bacteriol. DOI: 10.1128/jb.00252-22

Enhanced Fusobacterium nucleatum Genetics Using Host DNA Methyltransferases To Bypass Restriction-Modification Systems. Umaña A, Nguyen TTD, Sanders BE, Williams KJ, Wozniak B, Slade DJ. J Bacteriol  DOI: 10.1128/jb.00279-22

Extracellular DNA enhances biofilm integrity and mechanical properties of mucoid Pseudomonas aeruginosa. Ferguson DL, Gloag ES, Parsek MR, Wozniak DJ. J Bacteriol DOI: 10.1128/jb.00238-23


A Family of Spore Lipoproteins Stabilizes the Germination Apparatus by Altering Inner Spore Membrane Fluidity in Bacillus subtilis Spores Flores MJ, Duricy K, Choudhary S, Laue M, Popham DL. J Bacteriol DOI: 10.1128/jb.00142-23

*Publication highlighted in the American Society for Microbiology "This Week in Microbiology" podcast

A prototrophic suppressor of a Vibrio fischeri D-glutamate auxotroph reveals a member of the periplasmic broad-spectrum racemase family (BsrF) Coppinger MN, Laramore K, Popham DL, Stabb EV. J Bacteriol DOI: 10.1128/jb.00333-23

Engineered Live Bacteria as Disease Detection and Diagnosis Tools. Tanniche I, Behkam B. J Biol Eng DOI: 10.1186/s13036-023-00379-z

Characterizing Ion-Polymer Interactions in Aqueous Environment with Electric Fields. Vaissier Welborn V, Archer WR, Schulz MD.  J Chem Inf Model DOi: 10.1021/acs.jcim.2c01048

Super-enhanced evaporation of droplets from porous coatings. Hosseini M, Rodriguez A, Ducker, WA. J Colloid Interface Sci DOI: 10.1016/j.jcis.2022.11.065

Antimicrobial mechanism of cuprous oxide (Cu2O) coatings. Behzadinasab S, Williams MD, Falkinham Iii JO, Ducker WA. J Colloid Interface Sci. DOI: 10.1016/j.jcis.2023.08.136

 

Impact of Electronic Polarization on Preformed, β-Strand Rich Homogenous and Heterogenous Amyloid Oligomers. King KM, Sharp AK, Davidson DS, Brown AM, Lemkul JA. J Comput Biophys Chem DOI: 10.1142/s2737416521420059

Fast ViromeExplorer-Novel: Recovering Draft Genomes of Novel Viruses and Phages in Metagenomic Data Tithi SS, Aylward FO, Jensen RV, Zhang L. J Comput Biol DOI: 10.1089/cmb.2022.0397

King, K.MG., GSharp, A.K., Davidson, D.S., Lemkul, J.A., and Brown, A.M#. (2021). “Impact of Electronic Polarization on Preformed, β-Strand Rich Homogenous and Heterogeneous Amyloid Oligomers”. J. Comp. Biophys. Chem. 21(4) pp. 449-460. DOI:10.1142/S2737416521420059

Climate change impacts on the potential worldwide distribution of the soybean pest, Piezodorus guildinii (Hemiptera: Pentatomidae)Chen J, Jiang K, Wang S, Li Y, Zhang Y, Tang Z, Bu W. J Econ Entomol DOI: DOI: 10.1093/jee/toad058

Emergency department visits associated with satellite observed flooding during and following Hurricane Harvey Ramesh B, Jagger M, Zaitchik B, Kolivras K, Swarup S, Deanes L, Gohlke J. J Expo Sci Environ Epidemiol DOI: 10.1038/s41370-021-00361-1

Dithiocarbamates effectively inhibit the α-carbonic anhydrase from Neisseria gonorrhoeae.  Giovannuzzi S, Abutaleb NS, Hewitt CS, Carta F, Nocentini A, Seleem MN, Flaherty DP, Supuran CT.  J Enzyme Inhib Med Chem DOI: 10.1080/14756366.2021.1988945

Behavioral and postural analyses establish sleep-like states for mosquitoes that can impact host landing and blood feeding. Ajayi OM, Marlman JM, Gleitz LA, Smith ES, Piller BD, Krupa JA, Vinauger C, Benoit JB. J Exp Bio DOI: 10.1242/jeb.244032

Exploring the expanse between theoretical questions and experimental approaches in the modern study of evolvability Draghi JA, Ogbunugafor CB. J Exp Zool B Mol Dev Evol DOI: 10.1002/jez.b.23134

Spatial Versus Nonspatial Variance in Fecal Indicator Bacteria Differs Within and Between Ponds. Murphy CM, Weller DL, Ovissipour R, Boyer R, Strawn LK. J Food Prot DOI: 10.1016/j.jfp.2023.100045

Survival of Inoculated Campylobacter jejuni and Escherichia coli O157:H7 on Kale During Refrigerated Storage. Bywater A, Alexander K, Eifert J, Strawn LK, Ponder MA. J Food Prot DOI: 10.1016/j.jfp.2023.100042

Nitric oxide-mediated S-nitrosylation of IAA17 protein in intrinsically disordered region represses auxin signaling. Jing H, Yang X, Emenecker RJ, Feng J, Zhang J, Figueiredo MRA, Chaisupa P, Wright RC, Holehouse AS, Strader LC, Zuo J. J Genet Genomics DOI: 10.1016/j.jgg.2023.05.001

Dismantling myths on the airborne transmission of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) Tang J. Bahnfleth W, Bluyssen P, Buonanno G, Jimenez J, Kurnitski J, Li Y, Miller S, Sekhar C, Morawska L, Marr L, Melikov A, Nazaroff W, Nielsen P, Tellier R, Wargocki P, Dancer S. J Hosp Infect  DOI: 10.1016/j.jhin.2020.12.022

Molecular mechanisms responsible for the selective and low-grade induction of proinflammatory mediators in murine macrophages by lipopolysacharide Maitra U, Deng H, Glaros T, Baker B, Capelluto D, Li Z, Li L. J Immunol  DOI: 10.4049/jimmunol.1200857

Eos Promotes TH2 Differentiation by Interacting with and Propagating the Activity of STAT5. Tuazon JA, Read KA, Sreekumar BK, Roettger JE, Yaeger MJ, Varikuti S, Pokhrel S, Jones DM, Warren RT, Powell MD, Rasheed MN, Duncan EG, Childs LM, Gowdy KM, Oestreich KJ. J Immunol  DOI: 10.4049/jimmunol.2200861

Soft ticks perform evaporative cooling during blood-feeding Lazzari C, Fauquet A, Lahondère C, Araújo R, Pereira M. J Insect Physiol DOI: 10.1016/j.jinsphys.2021.104197

Prolonged shedding of Zika virus in human semen is associated with male reproductive tract inflammation.Vogt MB, McDonald EM, Delorey M, Mead PS, Hook SA, Hinckley AF, Werre SR, Brault AC, Duggal NK. J Infect Dis. DOI: 10.1093/infdis/jiac329

Additively manufactured respirators: quantifying particle transmission and identifying system-level challenges for improving filtration efficiency. Bezek LB, Pan J, Harb C, Zawaski CE, Molla B, Kubalak JR, Marr LC, Williams CB. J Manuf Syst. 2021 Jan 20. doi: 10.1016/j.jmsy.2021.01.002


Relating Eulerian and Lagrangian spatial models for vector-host disease dynamics through a fundamental matrix  Bernal E, Saucedo O, Tien J. J Math Biol  DOI: 10.1007/s00285-022-01761-z

Discovery of In Vivo Active Sphingosine-1-phosphate Transporter (Spns2) Inhibitors. Fritzemeier R, Foster D, Peralta A, Payette M, Kharel Y, Huang T, Lynch KR, Santos WL. J Med Chem DOI: 10.1021/acs.jmedchem.1c02171

2-Aminobenzoxazole Derivatives as Potent Inhibitors of the Sphingosine-1-Phosphate Transporter Spinster Homolog 2 (Spns2). Burgio AL, Shrader CW, Kharel Y, Huang T, Salamoun JM, Lynch KR, Santos WL.  J Med Chem DOI: 10.1021/acs.jmedchem.3c00149

Oxadiazolopyridine Derivatives as Efficacious Mitochondrial Uncouplers in the Prevention of Diet-Induced Obesity. Murray JH, Burgio AL, Beretta M, Hargett SR, Harris TE, Olzomer E, Grams RJ, Garcia CJ, Li C, Salamoun JM, Hoehn KL, Santos WL.  J Med Chem  
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New York State Tick Blitz: harnessing community-based science to understand range expansion of ticks.  Foley N, Balamurali S, Lampman J, Gangloff-Kaufman J, Eastwood G, Cumbie AN, Mader EM, Harrington LC. J Med Entomol.  DOI: 10.1093/jme/tjad039

Development of an Attractive Toxic Sugar Bait for the Control of Aedes j. japonicus (Diptera: Culicidae) Fryzlewicz L, VanWinkle A, Lahondère CJ Med Entomol DOI: 10.1093/jme/tjab151

Mining transcriptome data: Utilization of environmentally regulated promoters for protein expression and purification in Clostridium perfringens. Soncini SR, Camper GJ, Melville SBJ Microbiol Methods DOI: 10.1016/j.mimet.2022.106519

Mining transcriptome data: Utilization of environmentally regulated promoters for protein expression and purification in Clostridium perfringens. Soncini SR, Camper GJ, Melville SB. J Microbiol Methods DOI: 10.1016/j.mimet.2022.106519.

Comparative Transcriptomic Ananlysis of Pseudomonas aeruginosa Isolates from ICU Patients with Acute and Chronic Pneumonia Rao J, Adenikinju A, Gray J, Colpitts L, Prorock A, Bao Y, Kerkering T, Garner D, Jensen R. J Med Microbiol DOI: 10.23937/2643-4008/1710012

Use of magnetic nanotrap particles in capturing Yersinia pestis virulence factors, nucleic acids and bacteria Li A, Lin S, Lepene B, Zhou W, Kehn-Hall K, va Hoek M. J Nanobiotechnology DOI: 10.1186/s12951-021-00859-8

Promising tacrine / huperzine A-based dimeric acetylcholinesterase inhibitors for neurodegenerative disorders: From relieving symptoms to modifying diseases through multitarget Mak S Li W, Fu H, Luo J, Cui W, Hu S, Pang Y, Carlier PR, Tsim K, Pi R, Han Y. J Neurochem DOI: 10.1111/jnc.15379

 

Use of dietary phytochemicals for inhibition of trimethylamine N-oxide formation Iglesias-Carres L, Hughes M, Steele C, Ponder MA, Davy K, Neilson A.  J Nutr Biochem DOI: 10.1016/j.jnutbio.2021.108600

Mapping current and future thermal limits to suitability for malaria transmission by the invasive mosquito Anopheles stephensi Ryan SJ, Lippi CA, Viillena OC, Singh A, Murdock CC, Johnson LR. Malaria Journal DOI: 10.1186/s12936-023-04531-4

Binding of Venezuelan Equine Encephalitis Virus Inhibitors to Importin-α Receptors Explored with All-Atom Replica Exchange Molecular Dynamics. Delfing BM, Olson A, Laracuente XE, Foreman KW, Paige M, Kehn-Hall K, Lockhart C, Klimov DK  J Phys Chem B  DOI: 10.1021/acs.jpcb.3c00429


Modeling the dynamics of Usutu virus infection in birds Heitzman-Breen N, Golden J, Vazquez A, Kuchinsky S, Duggal N, Cuipe S. J Theor Biol DOI: 10.1016/j.jtbi.2021.110896

Randomly primed, strand-switching, MinION-based sequencing for the detection and characterization of cultured RNA viruses Young K, Lahmers K, Sellers H, Stallknecht D, Poulson R, Saliki J, Tompkins S, Padykula I, Siepker C, Howerth E, Todd M, Stanton J. J Vet Diagn Invest

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Modulation of SOCS3 Levels via STAT3 and Estrogen-ERαp66 Signaling during Hepatitis E Virus Replication in Hepatocellular Carcinoma Cells Sooryanarain H, Heffron CL, Mahsoub HM, Hassebroek AM, Wang B, Tian D, Ahmed SA, and X.J. Meng.  Journal of Virology  DOI:: 10.1128/jvi.01008-22.

Genome Number and Size Polymorphism in Zika Virus Infectious Units Sexton N, Bellis E, Murrieta R, Spangler M, Cline P, Weger-Lucarelli J. Ebel G. J Virol  DOI: 10.1128/JVI.00787-20 

The Multidrug Efflux System AcrABZ-To1lC Is Essential for Infection of Salmonella Typhimurium by the Flagellum-Dependent Bacteriophage Chi Esteves N, Porwollik S, McClelland M, Scharf B.  J Virol DOI: 10.1128/JVI.00394-21

Implications of the Coffee-Ring Effect on Virus Infectivity Huang Q, Wang W, Vikesland PJ. Langmuir DOI: 10.1021/acs.langmuir.1c01610

Individual quarantine versus active monitoring of contacts for the mitigation of COVID-19: a modeling study. Peak CM, Kahn R, Grad YH, Childs LM, Li R, Lipstitch M, Buckee CO. Lancet Infect Dis. 2020 Sep;20(9):1025-1033.  doi: 10.1016/S1473-3099(20)30361-3.

Increasing arbovirus risk in Chile and neighboring countries in the Southern Cone of South America. Estallo EL, Sippy R, Robert MA, Ayala S, Pizard CJ, Pérez-Estigarribia PE, Stewart-Ibarra AM The Lancet Regional Health - Americas  DOI: 10.1016/j.lana.2023.100542

Environmental Stability of Enveloped Viruses Is Impacted by Initial Volume and Evaporation Kinetics of Droplets. French AJ, Longest AK, Pan J, Vikesland PJ, Duggal NK, Marr LC, Lakdawala SS. mBio DOI: 10.1128/mbio.03452-22

Fetal Loss in Pregnant Rabbits Infected with Genotype 3 Hepatitis E Virus Is Associated with Altered Inflammatory Responses, Enhanced Virus Replication, and Extrahepatic Virus Dissemination with Positive Correlations with Increased Estradiol Level. Mahsoub HM, Heffron CL, Hassebroek AM, Sooryanarain H, Wang B, LeRoith T, Rodríguez GR, Tian D, and X.J. MengmBio DOI: 10.1128/mbio.00418-23. 

Ribavirin Treatment Failure-Associated Mutation, Y1320H, in the RNA-Dependent RNA Polymerase of Genotype 3 Hepatitis E Virus (HEV) Enhances Virus Replication in a Rabbit HEV Infection Model. Wang B, Mahsoub HM, Li W, Heffron CL, Tian D, Hassebroek AM, LeRoith T,Meng XJ mBio DOI: 10.1128/mbio.03372-22

The Shigella Spp. Type III Effector Protein OspB Is a Cysteine Protease. Wood TE, Westervelt KA, Yoon JM, Eshleman HD, Levy R, Burnes H, Slade DJ, Lesser CF, Goldberg MB mBio. DOI: 10.1128/mbio.01270-22

Sooryanarain H, Ahmed SA , Meng XJ.  “Progesterone-Mediated Enhancement of Hepatitis E Virus Replication in Human Liver Cells” mBio, 2021 Jun 29;12(3): Impact Factor - 6.784 e0143421.doi: 10.1128/mBio.01434-21. Epub 2021 Jun 22. PMID: 34154410,: PMC8262892DOI: 10.1128/mBio.01434-21

Pleiotropic Odorant-Binding Proteins Promote Aedes aegypti Reproduction and Flavivirus Transmission Dong S, Ye Z, Tikhe C, Tu ZJ, Zweibel L, Dimopoulos G. mBio DOI: 10.1128/mBio.02531-21

MmuPV1 E6 induces cell proliferation and other hallmarks of cancer Romero-Masters JC, Muehlbauer LK, Hayes M, Grace M, Shishkova E, Coon JJ, Munger K, Lambert PF. mBio DOI: 10.1128/mbio.02458-23

Uniting infectious disease and physical science principles on the importance of face masks for COVID-19. Gandhi M, Marr LCMed (N Y) Jan 15;2(1):29-32. doi: 10.1016/j.medj.2020.12.008. 

Investigating plant disease outbreaks with long-read metagenomics: sensitive detection and highly resolved phylogenetic reconstruction applied to Xylella fastidiosa. Johnson MA, Liu H, Bush E, Sharma P, Yang S, Mazloom R, Heath LS, Nita M, Li S, Vinatzer BA .Microb Genom DOI: 10.1099/mgen.0.000822

Johnson MAG, Liu H, Bush E, Sharma PG, Yang SG, Mazloom RGHeath LS, Nita M, Li S, Vinatzer BA (in press) “Investigating plant disease outbreaks with long-read metagenomics: sensitive detection and strain-level identification of Xylella fastidiosa.” Microbial Genomics.

Sharma PG, Johnson MAG, Mazloom RG, Allen C, Heath LA, Lowe-Power TM, Vinatzer BA (2022) “Meta-analysis of the Ralstonia solanacearum species complex (RSSC) based on comparative evolutionary genomics and reverse ecology.” Microbial Genomics 8(3). DOI: 10.1099/mgen.0.000791

Complete Genome Sequence of Providencia stuartii CMC-4104, Isolated from a Human Splenic Abscess, Containing Multiple Copies of NDM-1 and PER-1 Carbapenem Resistance Genes Rao J, Stornelli NK, Everson NA, McDaniel LF, Gomez De La Espriella M, Faulhaber JR, Todd SM, Lahmers KK, Jensen RV. Microbiol Resour Announce DOI: 10.1128/mra.00514-22

Genome Sequences for Two Acinetobacer baumannii Strains Obtained Using the Unicycler Hybrid Assembly Pipeline Farrow J, Pesci E, Slade DJ.  Microbiol Resour Announc DOI: 10.1128/MRA.00017-21

Complete Genome Sequence of Pseudomonas aeruginosa CMC-097, Isolated from a Ventilator Associated Pneumonia Patient, Containing a Novel Carbapenem Resistance Class 1 Integron Rao J, Adenikinju A, Kerkering TM, Garner D, Jensen R. Microbiol Resour Announc 
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RNA-seq-based transcriptome analysis of a cefquinome-treated, highly resistant, and virulent MRSA strain Iqbal Z, Hussain H, Seleem M, Shabbir M, Sattar A, Aqub A, Kuang X, Ihsan A, Hao H Microb Pathog 
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Genetic basis of molecular mechanisms in β-lactam resistant gram-negative bacteria Hussain H, Aqib A, Seleem MN, Shabbir M, Hao H, Iqbal Z, Fakhar E-Alam Kulyar, Zaheer T, Li K. Microb Pathog
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Long-read metagenomic sequencing reveals shifts in associations of antibiotic resistance genes with mobile genetic elements from sewage to activated sludge. Dai D, Brown C, Bürgmann H, Larsson DGJ, Nambi I, Zhang T, Flach CF, Pruden A, Vikesland PJ. Microbiome  DOI: 10.1186/s40168-021-01216-5

Synthesis, Characterization, and Non-Covalent Interactions of Palladium (II)-Amino Acid Complexes Hobard Jr D, Berg M, Rogers H, Merola JS. Molecules DOI: 10.3390/molecules26144331

Phylogenetic Signal, Congruence, and Uncertainty across Bacteria and Archaea Martinez-Gutierrez C, Aylward FMol Biol Evol DOI: 10.1093/molbev/msab254

Patterns of genetic differentiation imply distinct phylogeographic history of the mosquito species Anopheles messeae and Anopheles daciae in Eurasia. Brusentsov II, Gordeev MI, Yurchenko AA, Karagodin DA, Moskaev AV, Hodge JM, Burlak VA, Artemov GN, Sibataev AK, Becker N, Sharakhov IV, Baricheva EM, Sharakhova MVMol Ecol  DOI:10.1111/mec.17127

FliL and its paralog MotF have distinct roles in the stator activity of the Sinorhizobium meliloti flagellar motor. Sobe RC, Gilbert C, Vo L, Alexandre G, Scharf BE.  Mol Microbiol. DOI: 10.1111/mmi.14964

Post-transcriptional control of the essential enzyme MurF by a small regulatory RNA in Brucella abortus. King KA, Benton AH, Caudill MT, Stoyanof ST, Kang L, Michalak P, Lahmers KK, Dunman PM, DeHart TG, Ahmad SS, Jutras BL, Poncin K, De Bolle X, Caswell CC. Mol Microbiol DOI: 10.1111/mmi.15207

The swimming defect caused by the absence of the transcriptional regulator LdtR in Sinorhizobium meliloti is restored by mutations in the motility genes motA and motS. Sobe RC, Scharf BEMol Microbiol DOI: 10.1111/mmi.15247

North American House Sparrows Are Competent for Usutu Virus Transmission. Kuchinsky SC, Marano J, Hawks SA, Loessberg E, Honaker CF, Siegel PB, Lahondère C, LeRoith T, Weger-Lucarelli J, Duggal NK. mSphere.  DOI: 10.1128/msphere.00295-22

Dye KJG, Vogelaar NJ, Sobrado, P, and Yang Z. “A high throughput screen for inhibitors of the type IV pilus assembly ATPase PilB.” mSphere 6 (2): e00129-21. 2021. DOI: 10.1128/mSphere.00129-21

North American House Sparrows Are Competent for Usutu Virus Transmission. Kuchinsky SC, Marano J, Hawks SA, Loessberg E, Honaker CF, Siegel PB, Lahondère C, LeRoith T, Weger-Lucarelli J, Duggal NK. mSphere. 
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High-Throughput Screen for Inhibitors of the Type IV Pilus Assembly ATPase PilB Dye K, Vogelaar N, Sobado P, Yang Z. mSphere DOI: 10.1128/mSphere.00129-21

North American House Sparrows Are Competent for Usutu Virus Transmission. Kuchinsky SC, Marano J, Hawks SA, Loessberg E, Honaker CF, Siegel PB, Lahondère C, LeRoith T, Weger-Lucarelli J, Duggal NK. mSphere. 
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High Transcriptional Activity and Diverse Functional Repertoires of Hundreds of Giant Viruses in a Coastal Marine System Ha A, Moniruzzaman M, Aylward F. mSystems DOI: 10.1128/mSystems.00293-21

High Transcriptional Activity and Diverse Functional Repertoires of Hundreds of Giant Viruses in a Coastal Marine System Ha A, Moniruzzaman M, Aylward F
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Particulate Metabolites and Transcripts Reflect Diel Oscillations of Microbial Activity in the Surface Ocean Boysen A, Carlson L, Durham B, Groussman, Aylward F, Ribalet F, Heal K, White A, DeLong E, Armbrust E, Ingalls A. mSystems DOI: 10.1128/mSystems.00896-20

Towards the Characterization and Engineering of Bacteriophages in the Gut Microbiome Hsu B. mSystems 
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Survey of zearalenone and type-B trichothecene mycotoxins in swine feed in the USA Pack E, Weiland S, Musser R, Schmale DG. Mycotoxin Res DOI: 10.1007/s12550-021-00442-y

Defective viral genomes as therapeutic interfering particles against flavivirus infection in mammalian and mosquito hosts Rezelj V, Carrau L, Merwaiss F, Levi L, Erazo D, Tran Q, Henrion-Lacritick A, Gausson V, Suzuki Y, Shengjuler D, Meyer B, Vallet T, Weger-Lucarelli J, Bernhauerová V, Titievsky A, Sharov V, Pietropaoli S, DiazSalinas M, Legros V, Pardigon N, Barba-Spaeth G, Brodsky L, Saleh M, Vignuzzi M.  Nat Commun DOI: 10.1038/s41467-021-22341-7

Development and implementation of a scalable and versatile test for COVID-19 diagnostics in rural communities Ceci A, Munox-Ballester C, Tegge AN, Brown KL, Umans RA, Michel FM, Patel D, Tewari B, Martin J Alcoreza O, Maynard T Martine-Martine D, Bordwine P, Bissell N, Friedlander MJ, Sontheimer H, Finkielstein CV. Nature Communications DOI: 10.1038/s41467-021-24552-4

Microdiversity of the vaginal microbiome is associated with preterm birthLiao J, Shenhav L, Urban JA, Serrano M, Buck GA, Zhu B, Korem T Nature Communications DOI:10.1038/s41467-023-40719-7

Enhanced attenuation of chikungunya vaccines expressing antiviral cytokines. Chuong C, Cereghino CN, Rai P, Bates TA, Oberer M, Weger-Lucarelli J.NPJ Vaccines DOI: 10.1038/s41541-024-00843-x

 

Variation in temperature of peak trait performance constrains adaptation of arthropod populations to climatic warming. Pawar S, Huxley PJ, Smallwood TRC, Nesbit ML, Chan AHH, Shocket MS, Johnson LR, Kontopoulos D-, Cator LJ. Nat Ecol Evol. DOI: 10.1038/s41559-023-02301-8

Preterm birth is associated with xenobiotics and predicted by the vaginal metabolome Kindschuh WF, Baldini F, Liu MC, Liao J, Meydan Y, Lee HH, Heinken H, Thiele I, Thaiss CA, Levy M, Korem T. Nature Microbiology DOI: 10.1038/s41564-022-01293-8

Restriction endonuclease cleavage of phage DNA enables resuscitation from Cas13-induced bacterial dormancy. Williams MC, Reker AE, Margolis SR, Liao J, Wiedmann M, Rojas ER, Meeske AJ.
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DeHart, T. GG., Kushelman, M. R. G, Hildreth, S. B., Helm, R. F., & JutrasB. L. (2021). “The unusual cell wall of the Lyme disease spirochaete Borrelia burgdorferi is shaped by a tick sugar.” Nature Microbiology6(12),1583–1592. DOI:10.1038/s41564-021-01003-w

Ligand-free copper-catalyzed borylative defluorination: access to gem-difluoroallyl boronic acid derivatives. Gates AM, Jos S, Santos WL. Org Biomol Chem  DOI: 10.1039/d1ob01533h

Regio- and Stereoselective Copper-Catalyzed Borylation-Protodeboronation of 1,3-Diynes: Access to (Z)-1,3-Enynes. Burgio AL, Buchbinder NW, Santos WL. Org Lett. DOI: 10.1021/acs.orglett.3c00711

Morphological and molecular characterization of Quinqueserialis (Digenea: Notocotylidae) species diversity in North America-CORRIGENDUM.  Gagnon DK, Kasl EL, Preisser WC, Belden LK, Detwiler JT. Parasitology DOI: 10.1017/S0031182021001219

Seasonal variation in tsetse fly apparent density and Trypanosoma spp. infection rate and occurrence of drug-resistant trypanosomes in Lambwe, Kenya. Okello I, Nzalawahe J, Mafie E, Eastwood G. Parasitol Res DOI:10.1007/s00436-023-08081-4

Predicting temperature-dependent transmission suitability of bluetongue virus in livestock Moustaid F, Thronton Z, Slamani H, Ryan S, Johnson L. Parasit Vectors DOI: 10.1186/s13071-021-04826-y

Infection risk varies within urbanized landscapes: the case of coyotes and heartworm Worsley-Tonks K, Gehrt S, Anchor C, Escobar LE, Craft M. Parasit Vectors DOI: 10.1186/s13071-021-04958-1

The role of Culex territans mosquitoes in the transmission of Batrachochytrium dendrobatidis to amphibian hosts
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Alpha 1 Antitrypsin is an Inhibitor of the SARS-CoV-2-Primint Protease TMPRSS2. Azouz NP, Klinger AM, Callahan V, Akhrymuk IV, Elez K, Raich L, Henry BM, Benoit SW, Noé F, Kehn-Hall K, Rothenburg ME.  Pathog Immun DOI: 10.20411/pai.v6i1.408

Antibiotic perturbation of gut bacteria does not significantly alter host responses to ocular disease in a songbird species  Weitzman CLBelden LK, May M, Langager MM, Dalloul RA, Hawley DM. PeerJ  DOI: 10.7717/peerj.13559

Improved plaque assay for human coronaviruses 229E and OC43. Bracci N, Pan HC, Lehman C, Kehn-Hall K, Lin SC. PeerJ. 2020 Dec 21;8:e10639. doi: 10.7717/peerj.10639.

Skin bacterial community differences among three species of co-occurring Ranid frogs. Gajewski Z, Johnson LR, Medina D, Crainer WW, Nagy CM, Belden LK. PeerJ. DOI: 10.7717/peerj.15556

Comparative genomics of bacteria from amphibian skin associated with inhibition of an amphibian fungal pathogen, Batrachochytrium dendrobatidis. Wax N, Walke JB, Haak DC, Belden LK. PeerJ. DOI: 10.7717/peerj.15714

Diversity and ice nucleation activity of Pseudomonas syringae in drone-based water samples from eight lakes in Austria. Hanlon R, Jimenez-Sanchez C, Benson J, Aho K, Morris C, Seifried TM, Baloh P, Grothe H, Schmale DPeerJ DOI: 10.7717/peerj.16390

COVID-19 related messaging, beliefs, information sources, and mitigation behaviors in Virginia: a cross-sectional survey in the summer of 2020. Silverman RA, Short D, Wenzel S, Friesen MA, Cook NE Peer J DOI: 10.7717/peerj.16714

Catechol-containing compounds are a broad class of protein aggregation inhibitors: Redox state is a key determinant of the inhibitory activities. Velander P, Wu L, Hildreth SB, Vogelaar NJ, Mukhopadhyay B, Helm RF, Zhang S, Xu B. Pharmacol Res. DOI: 10.1016/j.phrs.2022.106409

The dominance of Fusarium meridonale over F. graminearum causing Gibberella ear rot in Brazil by be due to increased aggressiveness and competitiveness 
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The Power of a Statewide Survey When Phenotypic Testing Is Combined with Genomics-Enabled Molecular Characterization and Network Analyses Binatzer BA.  Phytopathology 
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Aggressiveness and mycotoxin production by Fusarium meridionale compared with F. graminearum on maize ears and stalks in the field Machado F, Barros A, McMaster N, Schamle D, Vaillancourt L, Del Ponte E. 
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Resveratrol Inhibits Venezuelan Equine Encephalitis Virus Infection by Interfering with AKT/GSK Pathway Lehman CW, Kehn-Hall K, Aggarwal M, Bracci NR, Pan HC, Panny L, Lamb RA, Lin SC. Plants (Basel) DOI: 10.3390/plants10020346. PMID: 33673026 

Genome size distributions in bacteria and archaea are strongly linked to evolutionary history at broad phylogenetic scales Martinez-Gutierrez CA, Aylward FO. PLoS Genet  DOI: 10.1371/journal.pgen.1010220

The AalNix3&4 isoform is required and sufficient to convert Aedes albopictus females into males. Zhao Y, Jin B, Liu P, Xiao X, Cai L, Xie Z, Kong L, Liu T, Yang W, Wu Y, Gu J, Tu Z, James AA, Chen XG. PLoS Genet  DOI: 10.1371/journal.pgen.1010280

CA Martinez-GutierrezG & FO Aylward. Genome size distributions in bacteria and archaea are strongly linked to phylogeny at broad phylogenetic scales. PLOS Genetics, In Press.

Partial masculinization of Aedes aegypti females by conditional expression of Nix. Kojin BB, Jakes E, Biedler JK, Tu Z, Adelman ZN. PLoS Negl Trop Dis. DOI: 10.1371/journal.pntd.0010598


Coursing hyenas and stalking lions: The potential for inter- and intraspecific interactions Barker NA, Joubert FG, Kasaona M, Shatumbu G, Stowbunenko V, Alexander KA, Slotow R, Getz, WM. PLOS One DOI: 10.1371/journal.pone.0265054

A complete theoretical framework for inferring horizontal gene transfers using partial order sets. Belal NA, Heath LSPLoS One DOI: 10.1371/journal.pone.0281824

Social network analysis and whole-genome sequencing to evaluate disease transmission in a large, dynamic population: A study of avian mycobacteriosis in zoo birds Witte C, Fowler JH, Pfeiffer W, Hungerford L, Braun J, Burchell J, Papendick R, Rideout B. PLos One 
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Spatiotemporal network structure among "friends of friends" reveals contagious disease process Witte C, Hungerford L, Rideout B, Papendick R, Fowler J. PLos One DOI: 10.1371/journal.pone.0237168

A conserved viral amphipathic helix governs the replication site-specific membrane association. Santhanantham, P., Zhao, W., He, G., Fenech, E., Murray, A., Yang, C., Diaz, A., Schuldiner, M., Wang, X.  PLoS Pathogens  DOI: 10.1371/journal.ppat.1010752

The E2 glycoprotein holds key residues for Mayaro virus adaptation to the urban Aedes aegypti mosquito. Cereghino C, Roesch F, Carrau L, Hardy A, Ribeiro-Filho HV, Henrion-Lacritick A, Koh C, Marano JM, Bates TA, Rai P, Chuong C, Akter S, Vallet T, Blanc H, Elliott TJ, Brown AM, Michalak P, LeRoith T, Bloom JD, Marques RE, Saleh MC, Vignuzzi M, Weger-Lucarelli J. PLoS Pathog DOI: 10.1371/journal.ppat.1010491

Defective viral genomes from chikungunya virus are broad-spectrum antivirals and prevent virus dissemination in mosquitoes Levi L, Rezelj V, Henrion-Lacritic A, Erazo D, Boussier J, Vallet T, Bernhauerova V, Suzuki Yasutsugu S, Carrau L, Weger-Lucarelli J, Saleh M, Vignuzzi  M. PLos Pathog DOI: 10.1371/journal.ppat.1009110

The peptidoglycan-associated protein NapA plays an important role in the envelope integrity and in the pathogenesis of the lyme disease spirochete Davis M, Brock A, DeHart T, Boribong B, Lee K, McClune M, Chang Y, Cramer N, Liu J, Jones C, Jutras B.     
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Host GRXC6 restricts Tomato yellow leaf curl virus infection by inhibiting the nuclear export of the V2 protein Zhao W, Zhou Y, Zhou X, Wang X, Ji Y. PLoS Pathog DOI: 10.1371/journal.ppat.1009844

An LIR motif in the Rift Valley fever virus NSs protein is critical for the interaction with LC3 family members and inhibition of autophagy. Petraccione K, Ali MGH, Cyr N, Wahba HM, Stocker T, Akhrymuk M, Akhrymuk I, Panny L, Bracci N, Cafaro R, Sastre D, Silberfarb A, O'Maille P, Omichinski J, Kehn-Hall KPLoS Pathog. doi: 10.1371/journal.ppat.1012093

A Versatile Method for Preparing Polysaccharide Conjugates view Thiol-Michael Addition Chen J, Ma X, Edgar KPolymers DOI: 10.3390/polym13121905

Longitudinal social network analysis of avian mycobacteriosis incidence in a large population of zoo birds Witte C, Vaida F, Papendick R, Hungerford L, Rideout B, Fowler J. Prev Vet Med 
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Hepatitis E virus infects brain microvascular endothelial cells, crosses the blood-brain barrier, and invades the central nervious system Tian D, Li W, Heffron CL, Wang B, Mahsoub HM, Sooryanarain H, Hassebroek AM, Clark-Deener S, LeRoith TMeng XJ Proc Natl Acad Sci U S A  DOI: 10.1073/pnas.2201862119

Two mutations in the ORF1 of genotype 1 hepatitis E virus enhance virus replication and may associate with fulminant hepatic failure. Wang B, Tian D, Sooryanarain H, Mahsoub HM, Heffron CL, Hassebroek AM, Meng XJ. Proc Natl Acad Sci U S A. DOI: 10.1073/pnas.2207503119

Declines in prevalence alter the optimal level of sexual investment for the malaria parasite Plasmodium falciparum   Early AM, Camponovo F, Pelleau S, Cerqueira GC, Lazrek Y, Volney B, Carrasquilla M, de Thoisy B, Buckee CO, Childs LM, Musset L, Neafsey DE.  Proc Natl Acad Sci U S A DOI: 10.1073/pnas.2122165119. 

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Samet, J.M., Burke, T.A., Lakdawala, S.S., Lowe, J.J., Marr, L.C., Prather, K.A., Shelton-Davenport, M., Volckens, J. (2021). “SARS-CoV-2 indoor air transmission is a threat that can be addressed with science” Proceedings of the National Academy of Sciences, 118, e2116155118, DOI: 10.1073/pnas.2116155118

Debin TianP, Wen Li, C. Lynn Heffron, Bo WangP, Hassan M. MahsoubP, Harini SooryanarainP, Anna M. HassebroekG, Sherrie Clark-Deener, Tanya LeRoith, and X.J. Meng. 2022. “Hepatitis E virus infects brain microvascular endothelial cells, crosses blood-brain barrier and invades the central nervous system.” Proceeding of the National Academy of Sciences USA.  In Press. DOI: 10.1073/pnas.2201862119

BCG vaccine protection from severe coronavirus disease 2019 (COVID-19)
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Killed whole-genome reduced-bacteria surface-expressed coronavirus fusion peptide vaccines protect against disease in a porcine model Maeda D, Tian D, Yu H, Dar N, Rajasekaran V, Meng S, Mahsoub H, Sooryanarain H, Wang B, Heffron C, Hassebroek A, LeRoith TMeng XJ, Zeichner S. Proc Natl Acad Sci U S A DOI: 10.1073/pnas.2025622118

The persistent threat of emerging plant disease pandemics to global food security Ristaino J, Anderson P, Bebber D, Brauman K, Cunniffe N, Feodoroff N, Finegold C, Garrett K, Gilligan C, Jones C, Martin M, MacDonald G, Neenan P, Records A, Schmale D, Tateosian L, Wei Q.
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The persistent threat of emerging plant disease pandemics to global food security Ristaino J, Anderson P, Bebber D, Brauman K, Cunniffe N, Fedoroff N, Finegold C, Garrett K, Gilligan C, Jones C, Martin M, MacDonald G, Neenan P, Records A, Schmale D, Tateosian L, Wei Q. Proc Natl Acad Sci U S A DOI: 10.1073/pnas.2022239118

Synergistic dispersal of plant pathogen spores by jumping-droplet condensation and wind Mukherjee R, Gruszewski H, Bilyeu L, Schmale DG, Boreyko J. Proc Natl Acad Sci U S A DOI: 10.1073/pnas.2106938118

 

The structural analysis of the periplasmic domain of Sinorhizobium meliloti chemoreceptor McpZ reveals a novel fold and suggests a complex mechanism of transmembrane signaling. Salar S, Ball NE, Baaziz H, Nix JC, Sobe RC, Compton KK, Zhulin IB, Brown AM, Scharf BE, Schubot FDProteins DOI: 10.1002/prot.26510

Bioprospecting the American Alligator Peptidome for antiviral peptides against Venezuelan equine encephalitis virus. Carfagno A, Lin SC, Chafran L, Akhrymuk I, Callahan V, Po M, Zhu Y, Altalhi A, Durkin DP, Russo P, Vliet KA, Webb-Robertson BJ, Kehn-Hall K, Bishop B. Proteomics DOI: 10.1002/pmic.200200237

Neuromodulation and differential learning across mosquito species Wolff G, Lahondere C, Vinauger C, Rylance E, Riffel JA.  Proc Biol Sci DOI: 10.1098/rspb.2022.2118

Colonization order of bacterial isolates on treefrog embroys impacts microbiome structure in tadpoles Jones KR, Hughey MC, Belden LK.  Proc Biol Sci DOI: 10.1098/rspb.2023.0308

Sex-biased infections scale to population impacts for an emerging wildlife disease. Kailing MJ, Hoyt JR, White JP, Kaarakka HM, Redell JA, Leon AE, Rocke TE, DePue JE, Scullon WH, Parise KL, Foster JT, Kilpatrick AM, Langwig KE.  Proc Biol Sci DOI: 10.1098/rspb.2023.0040

 

High virulence is associated with pathogen spreadability in a songbird-bacterial system Hawley DM, Thomason CA, Aberle MA, Brown R, Adelman JS. R Soc Open Sci DOI: 10.1098/rsos.220975

“Semisynthetic blasticidin S ester derivatives show enhanced antibiotic activity Gannett, C, Banks, P, Chuong, C, Weger-Lucarelli, J, Mevers, E, Lowell, AN RSC Med. Chem. DOI: 10.1039/D2MD00412G   

Airborne transmission of respiratory viruses Wang C, Prather K, Sznitman J, Jimenez J, Lakdawala S, Tufekci Z, Marr LC. Science  DOI: 10.1126/science.abd9149

Airborne transmission of SARS-CoV-2 Prather KA, Marr LC, Schooley RT, McDiarmid MA, Wilson ME, Milton DK. 
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Infectious diseases and social distancing in nature Stockmaier S, Stroeymeyt N, Shattuck E, Hawley D, Meyers L, Bolnick D.
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A paradigm shift to combat indoor respiratory infection Morawska L, Allen J, Bahnfleth W, Bluyssen P, Boerstra A, Buonanno G, Cao J, Dancer S, Floto A, Franchimon F, Greenhalgh T, Haworth C, Jogeling J, Isaxon C, Jimenez J, Kurnitski J, Li Y, Loomans M, Marks G, Marr LC, Mazzarell L, Melikov A, Mller S, Milton D, Nazaroff W, Nielsen P, Noakes C, Peccia J, Prather K, Querol X, Sekhar C, Seppänen O, Tanabe S, Tang J, Tellier R, Tham K, Wargocki P, Wierzbicka A, Yao M. Science DOI: 10.1126/science.abg2025 

Next generation sequencing approaches to evaluate water and wastewater quality Garner E, Davis B, Milligan E, ForrestBlair M, Keenum I, Moskowitz A, Pan J, Gnegy M, Liguori K, Gupta S, Prussin A, Marr LHeath LVikesland PZhang LPruden A.
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Connecting genomic islands across prokaryotic and phage genomes via protein families Aldaihani R, Heath LSSci Rep DOI: 10.1038/s41598-023-27584-6

The SKBR3 cell-membrane proteome reveals telltales of aberrant cancer cell proliferation and targets for precision medicine applications Karcini A, Lazar L Sci Rep DOI: 10.1038/s41598-022-14418-0

Wearable adjunct ozone and antibiotic therapy system for treatment of Gram-negative dermal bacterial infection.Roth A, Maruthamuthu MK, Nejati S, Krishnakumar A, Selvamani V, Sedaghat S, Nguyen J, Seleem MN, Rahimi R. Sci Rep  DOI: 10.1038/s41598-022-17495-3

Connecting genomic islands across prokaryotic and phage genomes via protein families Aldaihani R, Heath LSSci Rep DOI: 10.1038/s41598-023-27584-6

Visual threats reduce blood-feeding and trigger escape responses in Aedes aegypti mosquitoes Wynne NE, Chandrasegaran K, Fryzlewicz L, Vinauger CSci Rep DOI: 10.1038/s41598-022-25461-2

Environmental transmission of Pseudogymnoascus destructans to hibernating little brown bats.
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A time evolving online social network generation algorithm. Shirzadian P, Antony B, Gattani AG, Tasnina N, Heath LS. Sci Rep DOI: 10.1038/s41598-023-29443-w

Modeling poliovirus replication dynamics from life time-lapse single-cell imaging data Teufel A, Liu W, Draghi JA, Cameron C, Wilke C. Sci Rep  DOI: 10.1038/s41598-021-87694-x

Exploring the immunogenicity of an insect-specific virus vectored Zika vaccine candidate Tanelus M, Lopez K, Smith S, Muller JA, Porier DL, Auguste DI, Stone WB, Paulson SL, Auguste AJ. Sci Rep DOI: 10.1038/s41598-023-47086-9

Sugar feeding by invasive mosquito species on ornamental and wild plants. Upshur IF, Fehlman M, Parikh V, Vinauger C, Lahondère CSci Rep DOI: 10.1038/s41598-023-48089-2

 

Fusobacterium nucleatum induces proliferation and migration in pancreatic cancer cells through host autocrine and paracrine signaling. Udayasuryan B, Ahmad RN, Nguyen TTD, Umaña A, Monét Roberts L, Sobol P, Jones SD, Munson JM, Slade DJ, Verbridge SS.Sci Signal  DOI: 10.1126/scisignal.abn4948

Occurrence of opportunistic pathogens in private wells after major flooding events: A four state molecular survey. Mapili K, Rhoads WJ, Coughter M, Pieper KJ, Edwards MA, Pruden A. Sci Total Environ  DOI: 10.1016/j.scitotenv.2022.153901

Land cover and community water system characteristics as predictors of Safe Drinking Water Act violations in Central Appalachia, USA7. Smith E, Krometis LH, Czuba JA, Kolivras K. Sci Total Environ.  DOI: 10.1016/j.scitotenv.2022.159726

Reconstruction of GRACE terrestrial water storage anomalies using Multi-Layer Perceptrons for South Indian River basins. Kumar KS, AnandRaj P, Sreelatha K, Sridhar V. Sci Total Environ DOI: 10.1016/j.scitotenv.2022.159289

Microbiological and chemical drinking water contaminants and associated health outcomes in rural Appalachia, USA: A systematic review and meta-analysis Darling A, Patton H, Rasheduzzaman M, Guevara R, McCray J, Krometis LA, Cohen A. Sci Total Environ. DOI: 0.1016/j.scitotenv.2023.164036

Faucet-mounted point-of-use drinking water filters to improve water quality in households served by private wells. Patton H, Krometis LA, Ling E, Cohen A, Sarver E. Sci Total Enviro DOI: 10.1016/j.scitotenv.2023.167252

Sphingosine 1-phosphate signaling in perivascular cells enhances inflammation and fibrosis in the kidney. Tanaka S, Zheng S, Kharel Y, Fritzemeier RG, Huang T, Foster D, Poudel N, Goggins E, Yamaoka Y, Rudnicka KP, Lipsey JE, Radel HV, Ryuh SM, Inoue T, Yao J, Rosin DL, Schwab SR, Santos WL, Lynch KR, Okusa MD. Sci Transl Med DOI: 10.1126/scitranslmed.abj2681

Assessing pregnancy outcomes in cow-calf operations after administration of modified-live or killed virus vaccinations at the initiation of synchronization for fixed-time AI. Stewart JL, Currin J, Clark SG, Redifer T, Givens MD, Mercadante VRG. Theriogenology  DOI: 10.1016/j.theriogenology.2023.01.027

A simple method to detect Borrelia burgdorferi sensu lato proteins in different sub-cellular compartments by immunofluoresence Brock A, Jutras B. Ticks DOI: 10.1016/j.ttbdis.2021.101808

Stray Mexico origin cattle captured crossing into Southern Texas carry Babesia bovis and other tick-borne pathogens Scoles G, Lohmeyer K, Ueti M, Bonilla D, Lahmers K, Piccione J, Rogovsky A. Ticks Tick Borne Dis 
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Sarcoptic mange: An emerging panzootic in wildlife Escobar LE, Carver S, Cross PC, Rossi L, Almberg ES, Yabsley MJ, Niedringhaus KD, Van Wick P, Dominguez-Villegas E, Gakuya F, Xie Y, Angelone S, Gortázar C, Astorga F. Transbound Emerg Dis DOI: 10.1111/tbed.14082

Nanobiotechnology enabled approaches for wastewater based epidemiology Rahman A, Kang S, Wang W, Garg A, Maile-Moskowitz A, Vikesland P. Trends Analyt Chem DOI: 10.1016/j.trac.2021.116400

Infectious disease and cognition in wild populations Townsend A, Sewall K, Leonard A, Hawley D.  Trends in Ecology & Evolution DOI: 10.1016/j.tree.2022.06.005

Adaptive strategies and ecological roles of phages in habitats under physicochemical stress. Huang D, Xia R, Chen C, Liao J, Chen L, Wang D, Alvarez PJJ, Yu P.Trends Microbiol. DOI: 10.1016/j.tim.2024.02.002

Selective targeting of biting females to control mosquito-borne infectious diseases. Kojin BB, Compton A, Adelman ZN, Tu Z. Trends Parasitol DOI: 10.1016/j.pt.2022.05.012 

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Assessment of Two Novel Live-Attenuated Vaccine Candidates for Herpes Simplex Virus 2 (HSV-2) in Guinea Pigs Joyce J, Patel A, Murphy B, Carr D, Gershburg E, Bertke A. Vaccines DOI: 10.3390/vaccines9030258

Probiotic as adjuvant significantly improves protection of the Lanzhou trivalent rotavirus vaccine against heterologous challenge in a gnotobiotic pig model of human rotavirus infection and disease Parreno V, Bai M, Liu F, Jing J, Olney E, Li G, Wen K, Yang Y, Castellucci TB, Kocher JF, Zhou X, Yuan L Vaccines  DOI: 10.3390/vaccines10091529

D. W. DickPL. M. Childs, Z. Feng, J. Li, G. Rost, D. L. Buckeridge, N. H. Ogden, and J. M. Heffernan (2021) “COVID-19 Seroprevalence in Canada Modelling Waning and Boosting COVID-19 Immunity in Canada a Canadian Immunization Research Network Study.” Vaccines. DOI: 10.3390/vaccines10010017

Thermostable, Dissolvable Buccal Film Rotavirus Vaccine is Highly Effective in Neonatal Gnotobiotic Pig Challenge Model Hensley C, Zhou P, Schnur S, Mahsoub H, Liang Y, Wang M, Page C, Yuan L, Bronshtein V. Vaccines  DOI: 10.3390/vaccines9050437

Enemy of my Enemy A Novel Insect-Specific Flavivirus Offers a Promising Platform for a Zika Virus Vaccine Porier DL, Wilson SN, Auguste DI, Leber A, Coutermarsh-Ott S, Allen ICCaswell CC, Budnick JA, Bassaganya-Riera J, Hontecillas R, Weger-Lucarelli J, Weaver SC, Auguste AJ. Vaccines DOI: 10.3390/vaccines9101142

Development of Chimeric Hepatitis B – Norovirus P particle as candidate vaccine against Hepatitis B and norovirus infection. Giri-Rachman EA, Tan MI, Ramesh A, Fajar PA, Ilmi AN, Retnoningrum DS, Hertadi R, Irawan A, Wojciechowska GEP, Yuan L. Vaccine  DOI: 10.1016/j.jvacx.2023.100354

Combined live oral priming and intramuscular boosting regimen with Rotarix® and a nanoparticle-based trivalent rotavirus vaccine evaluated in gnotobiotic pig models of G4P[6] and G1P[8] human rotavirus infection. Hensley C, Nyblade C, Zhou P, Parreño V, Ramesh A, Frazier A, Frazier M, Garrison S, Fantasia-Davis A, Cai R, Huang PW, Xia M, Tan M, Yuan L.  Vaccines DOI: 10.3390/vaccines1105092

Development of Chimeric Hepatitis B – Norovirus P particle as candidate vaccine against Hepatitis B and norovirus infection. Giri-Rachman EA, Tan MI, Ramesh A, Fajar PA, Ilmi AN, Retnoningrum DS, Hertadi R, Irawan A, Wojciechowska GEP, Yuan L. Vaccine  DOI: 10.1016/j.jvacx.2023.100354

 

Interferon gamma protective against Sarcocystis neurona encephalitis in susceptible murine model Hay A, Potter A, Lindsay D, LeRoith T, Zhu J, Cashwell S, Witonsky SLeeth C. Vet Immunol Immunopathol  DOI:10.1016/j.vetimm.2021.110319

PD-1, PD-L1, and PD-L2 Gene Expression and Tumor Infiltrating Lymphocytes in Canine Melanoma Stevenson V, Perry S, Todd M, Huckle W, LeRoith TVet Pathol DOI: 10.1177/03009858211011939

Successful restoration of archived ovine formalin fixed paraffin-embedded tissue DNA and single nucleotide polymorphism analysis. Kravitz A, Tyler R, Manohar BM, Ronald BSM, Collins MT, Sriranganathan N. Vet Res Commun  DOI: 10.1007/s11259-022-09937-0

Successful restoration of archived ovine formalin fixed paraffinembedded tissue DNA and single nucleotide polymorphism analysis Kravitz A, Tyler R, Manohar BM, Ronald BSM, Collins MT, Sriranganthan NVet Res Commun DOI: 10.1007/s11259-022-09937-0

Adenovirus transduction to express human ACE2 causes obesity-specific morbidity in mice, impeding studies on the effect of host nutritional status on SARS-CoV-2 pathogenesis Rai P, Chuong C, LeRoith T, Smyth J, Panov J, Levi M, Kehn-Hall K, Duggal NWeger Lucarelli J. Virology DOI: 10.1016/j.virol.2021.08.014

Isolation of a novel insect-specific flavivirus with immunomodulatory effects in vertebrate systems Auguste AJ, Langsjoen R, Porier D, Erasmus J, Bergren N, Bolling B, Luo H, Singh A, Guzman H, Popov V, Travassos da Rosa A, Wang T, Kang L, Allen IC, Carrington C, Test R, Weaver S. Virology DOI: 10.1016/j.virol.2021.07.004

Isolation of a novel insect-specific flavivirus with immunomodulatory effects in vertebrate systems. Auguste AJ, Langsjoen RM, Porier DL, Erasmus JH, Bergren NA, Bolling BG, Luo H, Singh A, Guzman H, Popov VL, Travassos da Rosa APA, Wang T, Kang L, Allen IC, Carrington CVF, Tesh RB, Weaver SC. Virology DOI:

Development and characterization of infectious clones of two strains of Usutu virus Bates T, Chuong C, Hawks S, Rai P, Duggal NWeger-Lucarelli J. Virology  DOI: 10.1016/j.virol.2020.12.004  

 

Endogenous giant viruses contribute to intraspecies genomic variability in the model green alga Clamydomonas reinhardtii Moniruzzaman M, Erazo-Garcia MP, Aylward FO. Virus Evolution DOI: 10.1093/ve/veac102

Chikungunya virus molecular evolution in India since its re-emergency in 2005 Chaudhary S, Jain J, Kumar R, Shrinet J, Weaver SC, Auguste AJ, Sunil S. Virus Evolution DOI: 10.1093/ve/veab074

Phylogenetic characterization of Orthobunyaviruses isolated from Trinidad shows evidence of natural reassortment Foster JE, Lopez K, Eastwood G, Guzman H, Carrington CVF, Tesh RB, Auguste AJVirus Genes DOI: 10.1007/s11262-023-01973-5

EGR1 Upregulation during Encephalitic Viral Infections Contributes to Inflammation and Cell Death Lehman C, Smith A, Kelly J, Jacobs JL, Dinman JD, Kehn-Hall K. Viruses  DOI: 10.3390/v14061210

Stress Hormones Epinephrine and Corticosterone Selectively Reactivate HSV-1 and HSV-2 in Sympathetic and Sensory Neurons Goswami P, Ives AM, Abbott ARN, Bertke AS.  Viruses DOI: 10.3390/v14051115

Feasibility of polyclonal avian immunoglobulins (IgY) as prophylaxis against human norovirus infection Artman C, Idegwu N, Brumfield KD, Lai K, Hauta S, Falzarano D, Parreño V, Yuan L, Geyer JD, Goepp JG Viruses DOI: 10.3390/v14112371

A new gnotobiotic pig model of P[6] human rotavirus infection and disease for preclinical evaluation of rotavirus vaccines. Nyblade C, Hensley C, Parreno V, Zhou P, Frazier M, Frazier A, Ramesh A, Lei S, Degiuseppe JI, Tan M, Yuan LViruses DOI: 10.3390/v14122803

Alphavirus Particles Can Assemble with an Alternate Triangulation Number. Kaelber JT, Chmielewski D, Chiu W, Auguste AJ.  Viruses DOI: 10.3390/v14122650

Feasibility of polyclonal avian immunoglobulins (IgY) as prophylaxis against human norovirus infection Artman C, Idegwu N, Brumfield KD, Lai K, Hauta S, Falzarano D, Parreño V, Yuan L, Geyer JD, Goepp JG Viruses DOI: 10.3390/v14112371

A new gnotobiotic pig model of P[6] human rotavirus infection and disease for preclinical evaluation of rotavirus vaccines. Nyblade C, Hensley C, Parreno V, Zhou P, Frazier M, Frazier A, Ramesh A, Lei S, Degiuseppe JI, Tan M, Yuan L. Viruses DOI: 10.3390/v14122803

Alphavirus Particles Can Assemble with an Alternate Triangulation Number. Kaelber JT, Chmielewski D, Chiu W, Auguste AJ.  Viruses 

Antimicrobial Resistance in the Environment: Informing Policy and Practice to Prevent the Spread. Pruden A. Environ Sci Technol DOI: 10.1021/acs.est.2c07503

Salgado RG, Hawks SA, Frere F, Vázquez A, Huang CY, Duggal NK. “West Nile virus vaccination protects against Usutu virus disease in mice.” Viruses (2021). DOI: 10.3390/v13122352

Forde JE, Ciupe SM “Modeling the influence of vaccine administration on COVID-19 testing strategies” Viruses 13 (12), 2546, 2021 DOI: 10.3390/v13122546

Behnia M, Baer AG, Skidmore AM, Lehman CWG, Bracci NGKehn-Hall K, Bradfute SB. “Inactivation of Venezuelan Equine Encephalitis Virus Genome Using Two Methods.” Viruses. 2022 Jan 28;14(2):272. DOI: 10.3390/v14020272. PMID: 35215864

Oyewole, O.; Dunnavant, K.; Bhattarai, S.; Kharel, Y.; Lynch, K.L.; Santos, W.L.; Reid, S.P. “A Novel Sphingosine Kinase Inhibitor Suppresses Chikungunya Virus Infection.” Viruses, 2022, 14, 1123DOI: 10.3390/v14061123

Feasibility of polyclonal avian immunoglobulins (IgY) as prophylaxis against human norovirus infection Artman C, Idegwu N, Brumfield KD, Lai K, Hauta S, Falzarano D, Parreño V, Yuan L, Geyer JD, Goepp JG Viruses DOI: 10.3390/v14112371

PSGL-1 Inhibits the incorporation of SARS-CoV and SARS-CoV-2 spike glycoproteins into pseudovirions and impairs pseudovirus attachment and infectivity. He S, Waheed AA, Hetrick B, Dabbagh D, Akhrymuk IV, 
Kehn-Hall K, Freed EO, Wu Y. Viruses.
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Quantification of the Tradeoff between Test Sensitivity and Test Frequency in a COVID-19 Epidemic-A Multi-Scale Modeling Approach Forde J, Ciupe SViruses DOI: 10.3390/v13030457

Noble Metal Organometallic Complexes Display Antiviral Activity against SARS-CoV-2 Chuong C, MuChange C, Webb E, Rai P, Marano J, Bernier C, Merola JWeger-Lucarelli J Viruses DOI:10.3390/v13060980 

PERK is Critical for Alphavirus Nonstructural Protein Translation. Dahl B, Lehman CW, Akhrymuk I, Bracci NR, Panny L, Barrera MD, Bhalla N, Jacobs JL, Dinman JD, Kehn-Hall K. Viruses DOI: 10.3390/v13050892

Identification of Receptor Binding Proteins in Flagellotropic Agrobacterium Phase 7-7-1 Gonzalez F, Scharf B. Viruses DOI: 10.3390/v13071267

Feasibility of polyclonal avian immunoglobulins (IgY) as prophylaxis against human norovirus infection Artman C, Idegwu N, Brumfield KD, Lai K, Hauta S, Falzarano D, Parreño V, Yuan L, Geyer JD, Goepp JG Viruses DOI: 10.3390/v14112371

Patterns of genetic differentiation imply distinct phylogeographic history of the mosquito species Anopheles messeae and Anopheles daciae in Eurasia. Brusentsov II, Gordeev MI, Yurchenko AA, Karagodin DA, Moskaev AV, Hodge JM, Burlak VA, Artemov GN, Sibataev AK, Becker N, Sharakhov IV, Baricheva EM, Sharakhova MVMol Ecol  DOI:10.1111/mec.17127

 

Surface-enhanced Raman spectorscopy enabled evaluation of bacterial inactivation Wang W, Rahman A, Huang Q, Vikesland PWater Res DOI: 10.1016/j.watres.2022.118668

Making waves: The benefits and challenges of responsibly implementing wastewater-based surveillance for rural communities Cohen A, Vikesland P, Pruden A, Krometis L, Lee LM, Darling A, Yancey M, Helmick M, Singh R, Gonzalez R, Meit M, Degen M, Taniuchi M. Water Research DOI: 10.1016/j.watres.2023.121095

To what extent do water reuse treatments reduce antibiotic resistance indicators? A comparison of two full-scale systems. Keenum I, Calarco J, Majeed H, Hager-Soto EE, Bott C, Garner E, Harwood VJ, Pruden A. Water Res DOI: 10.1016/j.watres.2024.121425